- move all material to a dedicated folder
- store here conde environment files, which are now also updated

- directory tree test is skipped until protopipe 0.5.0 is available
- CI has been updated to only support conda-based installation also on
  macos
- yaml needed to be added to the test dependencies
- conda recipes moved back to root folder

Update CI

Add pyyaml as a dependency for testing

Update CI installation

Remove unused import

Fix CI installation order

Test CI  on macos-latest

Try giving CONDA permission to its own files

Update CI

- add macos-latest
- update conda env name

Forgot to unset env name

Use unambiguous conda env name

Import load_config from utils not from protopipe

also skip test that requires new protopipe

leave protopipe import in submit jobs

Test CI only on macos-latest

Test CI only with conda-based installation

Test CI also on ubuntu-latest but only conda

Fix bug introduced into merge script

remove stale code

Test package directory contents

fix ci test code

add test script for CI

Move logging.yaml to aux module and install it

Addressing codacy complaints; improving code style

Further codacy fixing

Further codacy fixing

Use safe_load when loading a config YAML file

Another batch of code style fixes

codacy fixing and fixing bugs introduced

Simplify logging custom formatter

see DIRACGrid/DIRAC#5786 for details why

When submitting the merging command, the particle type was not formatted

- added an option to disable the upload of the analysis config file
- added a loop to counteract some Dirac issues when splitting input data

- Output type was showing input sandbox
- added protopipe version used at submission

- strip newlines trailing characters from list entries,
- use logging.exception in case list is not found,
- use absolute file path from root directory

- for some reason now fts3 needs to be specified
- python version also specified as in Dirac and CTADIRAC

Update conda envs