Tweaks

HenrikBengtsson · Apr 11, 2015 · 502f346 · 502f346
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diff --git a/man/binMeans.Rd b/man/binMeans.Rd
@@ -63,15 +63,27 @@ mu <- double(length(x))
 mu[1:50] <- 5
 mu[101:150] <- -5
 y <- mu + rnorm(length(x))
+outliers <- c(25:30,175:180)
+y[outliers] <- y[outliers] - 5
 
 # Binning
 bx <- c(0,50,100,150,200)+0.5
 yS <- binMeans(y, x=x, bx=bx)
 
+# Plot
 plot(x,y)
 for (kk in seq(along=yS)) {
   lines(bx[c(kk,kk+1)], yS[c(kk,kk)], col="blue", lwd=2)
 }
+
+# Weighted binning
+w <- rep(1, times=length(x))
+w[outliers] <- 0.1  # Down-weight outliers
+ySw <- binMeans(y, w=w, x=x, bx=bx)
+
+for (kk in seq(along=yS)) {
+  lines(bx[c(kk,kk+1)], ySw[c(kk,kk)], col="red", lwd=2)
+}
 }
 
 \seealso{

diff --git a/man/matrixStats-package.Rd b/man/matrixStats-package.Rd
@@ -33,7 +33,8 @@
 }
 
 \section{How to cite this package}{
-  Henrik Bengtsson (2015). matrixStats: Methods that Apply to Rows and Columns of a Matrix. R package version 0.14.0. https://github.com/HenrikBengtsson/matrixStats
+  Henrik Bengtsson (2015). matrixStats: Methods that Apply to Rows and Columns of Matrices (and to
+Vectors). R package version 0.14.0-9000. https://github.com/HenrikBengtsson/matrixStats
 }
 
 \author{Henrik Bengtsson, Hector Corrada Bravo, Robert Gentleman, Ola Hossjer, Harris Jaffee, Peter Langfelder}