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 **NanoJ-Core** is an open-source ImageJ and Fiji plugin that provide the base high-performance computing engine that other NanoJ plugins need to run: [NanoJ-SRRF](https://github.com/HenriquesLab/NanoJ-SRRF), [NanoJ-SQUIRREL](https://bitbucket.org/rhenriqueslab/nanoj-squirrel/wiki/Home), [NanoJ-VirusMapper](https://bitbucket.org/rhenriqueslab/nanoj-virusmapper/wiki/Home) and [NanoJ-Fluidics](https://github.com/HenriquesLab/NanoJ-Fluidics).
 
-**NanoJ-Core** also provides image analysis methods for **Drift Correction** and **Channel Alignment**. Check out our [**bioRxiv preprint**](https://www.biorxiv.org/content/early/2018/10/01/432674) for a full description of the NanoJ features.
+**NanoJ-Core** also provides image analysis methods for **Drift Correction** and **Channel Alignment**. Check out our [**bioRxiv preprint**](https://www.biorxiv.org/content/early/2018/10/01/432674) for a full description of the NanoJ features, and the [**User Manual**](https://doi.org/10.6084/m9.figshare.7296767.v1) for an in-depth guide on how to use them.
 
 [![NanoJ Pre-Print](https://pbs.twimg.com/media/Doez3mnXsAA_RxN.jpg "NanoJ Pre-Print")](https://www.biorxiv.org/content/early/2018/10/01/432674)
 
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 ## Install NanoJ-Core ##