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feat: add starter for testing walkers
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import AnonymousWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestAnonymousWalker: | ||
def test_extract(self): | ||
canonical_walks = AnonymousWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import CommunityWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestCommunityWalker: | ||
def test_extract_community_walks(self): | ||
walks = CommunityWalker( | ||
4, float("inf") | ||
).extract_random_community_walks(KG, Vertex(str(generate_entities()))) | ||
assert type(walks) == list | ||
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def test_extract(self): | ||
canonical_walks = CommunityWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import HalkWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestHalkWalker: | ||
def test_extract(self): | ||
canonical_walks = HalkWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import NGramWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestNGramWalker: | ||
def test_extract(self): | ||
canonical_walks = NGramWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import WalkletWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestWalkletWalker: | ||
def test_extract(self): | ||
canonical_walks = WalkletWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |
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import random | ||
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import rdflib | ||
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from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import WeisfeilerLehmanWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestWeisfeilerLehmanWalker: | ||
def test_extract(self): | ||
# KeyError | ||
# self._label_map[x][n - 1] for x in graph.get_inv_neighbors(vertex) | ||
# | ||
# canonical_walks = WeisfeilerLehmanWalker(4, float("inf")).extract( | ||
# KG, generate_entities() | ||
# ) | ||
# assert type(canonical_walks) == set | ||
pass |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,27 @@ | ||
import random | ||
|
||
import rdflib | ||
|
||
from rdf2vec.converters import rdflib_to_kg | ||
from rdf2vec.graph import Vertex | ||
from rdf2vec.walkers import WildcardWalker | ||
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LABEL_PREDICATE = "http://dl-learner.org/carcinogenesis#isMutagenic" | ||
KG = rdflib_to_kg("samples/mutag.owl", label_predicates=[LABEL_PREDICATE]) | ||
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||
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def generate_entities(): | ||
return [ | ||
rdflib.URIRef( | ||
f"{LABEL_PREDICATE.split('#')[0] + '#'}{random.randint(0, 335)}" | ||
) | ||
for _ in range(random.randint(0, 200)) | ||
] | ||
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class TestWildcardWalker: | ||
def test_extract(self): | ||
canonical_walks = WildcardWalker(4, float("inf")).extract( | ||
KG, generate_entities() | ||
) | ||
assert type(canonical_walks) == set |