Repository for ISA datasets, which may be available in different formats (tab, RDF, JSON)
ISA tools API
Package to convert ISA-TAB files into RDF data relying on different semantic frameworks (OWL ontologies).
Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure
ISA Model and Serialization Specifications
a repo for a docker container for a microservice converting an MWTab to ISA-Tab format
Documentation for various xml2isa converters
ISAcreator is a Java desktop application which allows for the creation and editing of ISA-Tab files. Originally developed by Eamonn Maguire, with further contributions by Alejandra Gonzalez-Beltran and Philippe Rocca-Serra (Uni. of Oxford).
nmrml2isa for galaxy
mzml2isa for galaxy
jUtils, a miscellanea of small and handy general purpose utilities for Java
Generate ISA-Tab studies from .nmrML files
This is the development repository for the STATistics Ontology (STATO). For more information and demonstration on the ontology content, please visit its website:
Plugins developed for use in the ISAcreator. They should be placed in a 'Plugins' directory in the ISAcreator build environment.
OntoMaton facilitates ontology search and tagging functionalities within Google Spreadsheets.
Collaborative Open Plant Omics
Python parser for ISAtab, a biological file format for experimental metadata
ISAconfiguration files which have been created by the ISAconfigurator. These can be used by ISAcreator, ISAvalidator, ISAconverter and the BII Data Management Tool
ISA tools wordpress theme
Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the package also provides functionality to save the ISA-tab dataset, or each of its individual files. Additionally, it is also possible to update assay files. Currently, metadata associated to proteomics and metabolomi…
The ISAvalidator, ISA converter and BII data manager tools
xsl transformation from various XML format to ISA-Tab
The ISAconfigurator allows for creation of XML files (configuration files) used to build spreadsheets in the ISAcreator and for validation in the creator and ISAvalidation code. Led by Eamonn Maguire, Philippe Rocca-Serra (Uni. of Oxford).
A better sequence logo visualization
RESTful web service to use ISA API
iPython notebooks for learning how to use the ISA API