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Parse complete ISATab dataset #3

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agbeltran opened this issue Jul 12, 2012 · 2 comments
Closed

Parse complete ISATab dataset #3

agbeltran opened this issue Jul 12, 2012 · 2 comments
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Extend the code to work with all possible ISATab patterns
@ghost ghost assigned agbeltran Jul 12, 2012
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Commits associated with this issue: c14e689, 7922f76

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Some other commits associated with this issue where I forgot to add the comment to link them here: cfed8f7, afd1e59

agbeltran added a commit that referenced this issue Jul 18, 2012
@agbeltran
Dealing with assay files and data files #3
4cd6a06
agbeltran added a commit that referenced this issue Jul 18, 2012
@agbeltran
Function isatab2bioc returns an isaobject and assay types are process…
d69da05 
…ed in a different function #3
agbeltran added a commit that referenced this issue Jul 19, 2012
@agbeltran
Added samples, samples_per_assay, samples_per_study, assays_per_sample …
4e61c31 
…#3
agbeltran added a commit that referenced this issue Jul 19, 2012
@agbeltran
Added sample_to_rawdatafile, sample_to_assayname, rawdatafile_to_samp…
0aca2d5 
…le and assayname_to_sample #3
agbeltran added a commit that referenced this issue Jul 19, 2012
@agbeltran
Relations between sampes/raw data files/assay names now working for a…
34b7773 
…ll assay files #3
agbeltran added a commit that referenced this issue Jul 19, 2012
@agbeltran
Added new synonym of Raw Data File #3
2f4ff2f
agbeltran added a commit that referenced this issue Jul 20, 2012
@agbeltran
Added technology_types list, added more elements to be returned by is…
a483557 
…atab2bioc function, commented out flow cytrometry processing for now, started fixing technology types processing function #3 #5
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