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Message printed out on import #374

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Zigur opened this issue Nov 18, 2020 · 3 comments
Closed

Message printed out on import #374

Zigur opened this issue Nov 18, 2020 · 3 comments

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@Zigur
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Zigur commented Nov 18, 2020

When the core isa model objects are loaded, e.g.:

from isatools.model import Investigation, Study

These two strings are printed out:

LOG: <Logger isatools (DEBUG)>
/Users/massi/.pyenv/versions/3.7.5/envs/isa-create-notebook-3.7.5/src/isatools/isatools/net/resources/saxon9/saxon9he.jar

See also the screenshot below.

Screenshot 2020-11-18 at 19 13 24

These should be removed before the new issue is released, but I have serious issues in finding where they could be as they are not in the isatools/model.py file. DO you have any suggestion on this @proccaserra ?

@Zigur Zigur added this to the 0.12 milestone Nov 18, 2020
Zigur added a commit that referenced this issue Nov 19, 2020
@Zigur
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Zigur commented Nov 19, 2020

The second logging message should be removed now. The LOG: <Logger isatools (DEBUG)> message still has to be found

@proccaserra
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@Zigur yes most probably coming from those print statements i left in biocrates2isa.py.

Zigur added a commit that referenced this issue Nov 24, 2020
@Zigur
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Zigur commented Nov 24, 2020

The LOG: <Logger isatools (DEBUG)> message was in isatools/magetab.py, now removed

@Zigur Zigur closed this as completed Nov 24, 2020
Zigur added a commit that referenced this issue Nov 24, 2020
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