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Classification model for dicom files #545

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aymanechilah
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New model based on ViT for UoM

agsfer and others added 30 commits April 20, 2023 15:16
* Add model 2023-04-20-explain_clinical_doc_medication_en

* Add model 2023-04-20-explain_clinical_doc_radiology_en

* Add model 2023-04-20-explain_clinical_doc_ade_en

* Add model 2023-04-20-explain_clinical_doc_era_en

* Add model 2023-04-20-explain_clinical_doc_carp_en

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Co-authored-by: Cabir40 <cabir4006@gmail.com>
* Update legal_document_understanding.md

* Alt update
* [BUMP] Spark-NLP version

* Fix type hinting (#144)

* [FIX] Type Hint bug

* [DOCS] update release notes

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Co-authored-by: David Cecchini <dadachini@hotmail.com>
* [BUMP] Version to 4.4.4

* [DOCS] Update release notes
* Update demomenu.html

* Update quickstart.md
…_en (#170)

* Add model 2023-04-27-genericclassifier_sdoh_insurance_status_sbiobert_cased_mli_en

* Add model 2023-04-28-genericclassifier_sdoh_insurance_type_sbiobert_cased_mli_en

* Add model 2023-04-28-genericclassifier_sdoh_insurance_coverage_sbiobert_cased_mli_en

* Update 2023-04-27-genericclassifier_sdoh_insurance_status_sbiobert_cased_mli_en.md

* Update 2023-04-28-genericclassifier_sdoh_insurance_type_sbiobert_cased_mli_en.md

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Co-authored-by: hsaglamlar <hsaglamlar@gmail.com>
Co-authored-by: Halil Saglamlar <47859156+hsaglamlar@users.noreply.github.com>
* 2023-04-21-fingen_flant5_base_en (#142)

* Add model 2023-04-21-fingen_flant5_base_en

* Update 2023-04-21-fingen_flant5_base_en.md

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Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>

* Add model 2023-04-26-finner_bert_suspicious_activity_reports_en (#150)

Co-authored-by: gadde5300 <gadde5300@gmail.com>

* 2023-04-27-finpipe_suspicious_activity_reports_en (#164)

* Add model 2023-04-27-finpipe_suspicious_activity_reports_en

* Update 2023-04-27-finpipe_suspicious_activity_reports_en.md

* Update 2023-04-27-finpipe_suspicious_activity_reports_en.md

* Update 2023-04-27-finpipe_suspicious_activity_reports_en.md

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Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>

* 2023-04-28-fingen_flant5_finetuned_sec10k_en (#173)

* Add model 2023-04-28-fingen_flant5_finetuned_sec10k_en

* Update 2023-04-28-fingen_flant5_finetuned_sec10k_en.md

* Update 2023-04-28-fingen_flant5_finetuned_sec10k_en.md

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Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>

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Co-authored-by: jsl-models <74001263+jsl-models@users.noreply.github.com>
Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>
* 2023-04-16-legner_nda_remedies_en (#123)

* Add model 2023-04-16-legner_nda_remedies_en

* Update 2023-04-16-legner_nda_remedies_en.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-19-legner_nda_return_of_conf_info_en (#132)

* Add model 2023-04-19-legner_nda_return_of_conf_info_en

* Update 2023-04-19-legner_nda_return_of_conf_info_en.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* Add model 2023-04-20-legmulticlf_covid19_exceptions_italian_it (#135)

Co-authored-by: Mary-Sci <meryemyildiz366@gmail.com>

* 2023-04-21-leggen_flant5_base_en (#143)

* Add model 2023-04-21-leggen_flant5_base_en

* Update 2023-04-21-leggen_flant5_base_en.md

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Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>

* 2023-04-24-legner_nda_req_discl_en (#146)

* Add model 2023-04-24-legner_nda_req_discl_en

* Update 2023-04-24-legner_nda_req_discl_en.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-25-legner_greek_legislation_el (#148)

* Add model 2023-04-25-legner_greek_legislation_el

* Update 2023-04-25-legner_greek_legislation_el.md

* Update 2023-04-25-legner_greek_legislation_el.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* Add model 2023-04-26-legmulticlf_online_terms_of_service_english_en (#153)

Co-authored-by: Mary-Sci <meryemyildiz366@gmail.com>

* 2023-04-26-legner_mapa_bg (#155)

* Add model 2023-04-26-legner_mapa_bg

* Update 2023-04-26-legner_mapa_bg.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-26-legner_mapa_da (#156)

* Add model 2023-04-26-legner_mapa_da

* Update 2023-04-26-legner_mapa_da.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_de (#159)

* Add model 2023-04-27-legner_mapa_de

* Update 2023-04-27-legner_mapa_de.md

* Add model 2023-04-27-legner_mapa_el

* Update 2023-04-27-legner_mapa_el.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_en (#160)

* Add model 2023-04-27-legner_mapa_en

* Update 2023-04-27-legner_mapa_en.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_es (#162)

* Add model 2023-04-27-legner_mapa_es

* Update 2023-04-27-legner_mapa_es.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_fr (#163)

* Add model 2023-04-27-legner_mapa_fr

* Update 2023-04-27-legner_mapa_fr.md

* Add model 2023-04-27-legner_mapa_it

* Update 2023-04-27-legner_mapa_it.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_lt (#166)

* Add model 2023-04-27-legner_mapa_lt

* Update 2023-04-27-legner_mapa_lt.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_nl (#167)

* Add model 2023-04-27-legner_mapa_nl

* Update 2023-04-27-legner_mapa_nl.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-27-legner_mapa_pt (#169)

* Add model 2023-04-27-legner_mapa_pt

* Update 2023-04-27-legner_mapa_pt.md

* Add model 2023-04-27-legner_mapa_ro

* Update 2023-04-27-legner_mapa_ro.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-28-legner_mapa_cs (#172)

* Add model 2023-04-28-legner_mapa_cs

* Update 2023-04-28-legner_mapa_cs.md

* Add model 2023-04-28-legner_mapa_ga

* Update 2023-04-28-legner_mapa_ga.md

* Update 2023-04-28-legner_mapa_ga.md

* Add model 2023-04-28-legner_mapa_fi

* Update 2023-04-28-legner_mapa_fi.md

* Add model 2023-04-28-legner_mapa_sk

* Update 2023-04-28-legner_mapa_sk.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-29-legpipe_alias_en (#176)

* Add model 2023-04-29-legpipe_alias_en

* Update 2023-04-29-legpipe_alias_en.md

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Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>

* 2023-04-29-leggen_flant5_finetuned_en (#177)

* Add model 2023-04-29-leggen_flant5_finetuned_en

* Update 2023-04-29-leggen_flant5_finetuned_en.md

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Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>

* Delete 2023-04-29-legpipe_alias_en.md

* 2023-04-30-legpipe_alias_en (#178)

* Add model 2023-04-30-legpipe_alias_en

* Update 2023-04-30-legpipe_alias_en.md

* Update 2023-04-30-legpipe_alias_en.md

* Update 2023-04-30-legpipe_alias_en.md

* Update 2023-04-30-legpipe_alias_en.md

---------

Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>
Co-authored-by: Juan Martinez <36634572+josejuanmartinez@users.noreply.github.com>

---------

Co-authored-by: jsl-models <74001263+jsl-models@users.noreply.github.com>
Co-authored-by: bunyamin-polat <muhendisbp@gmail.com>
Co-authored-by: Bünyamin Polat <78386903+bunyamin-polat@users.noreply.github.com>
Co-authored-by: Mary-Sci <meryemyildiz366@gmail.com>
Co-authored-by: gadde5300 <gadde5300@gmail.com>
Co-authored-by: GADDE SAI SHAILESH <69344247+gadde5300@users.noreply.github.com>
Co-authored-by: Damla-Gurbaz <dml.grbz.01@gmail.com>
Co-authored-by: Meryem1425 <vildansarikaya25@gmail.com>
* Add model 2023-04-28-ner_profiling_biobert_en

* Add model 2023-04-28-ner_profiling_clinical_en

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Co-authored-by: Cabir40 <cabir4006@gmail.com>
Co-authored-by: Cabir ÇELİK <ogr.cabir.celik@ahievran.edu.tr>
Co-authored-by: andrei9825 <andrei@johnsnowlabs.com>
jsl-models and others added 26 commits July 31, 2023 22:39
* Add model 2023-07-26-ner_section_header_diagnosis_en

* Update 2023-07-26-ner_section_header_diagnosis_en.md

* fixed description

* Update 2023-07-26-ner_section_header_diagnosis_en.md

* Add model 2023-07-28-ner_posology_langtest_en

* edited python code

* Update 2023-07-28-ner_posology_langtest_en.md

* Update 2023-07-28-ner_posology_langtest_en.md

---------

Co-authored-by: Cabir40 <cabir4006@gmail.com>
Co-authored-by: Cabir C <64752006+Cabir40@users.noreply.github.com>
Co-authored-by: muhammetsnts <76607915+muhammetsnts@users.noreply.github.com>
* Add model 2023-08-01-sbiobertresolve_loinc_augmented_en

* Update 2023-08-01-sbiobertresolve_loinc_augmented_en.md

* Update 2023-08-01-sbiobertresolve_loinc_augmented_en.md

* Add model 2023-08-01-sbiobertresolve_loinc_numeric_en

* Update 2023-08-01-sbiobertresolve_loinc_augmented_en.md

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Co-authored-by: ahmet-mesut <drmesutbirol@gmail.com>
Co-authored-by: muhammetsnts <76607915+muhammetsnts@users.noreply.github.com>
* Add model 2023-08-14-abbreviation_pipeline_en

* Update 2023-08-14-abbreviation_pipeline_en.md

* Add model 2023-08-14-icd10cm_giant_pipeline_en

* Update 2023-08-14-icd10cm_giant_pipeline_en.md

* Add model 2023-08-14-rxnorm_giant_pipeline_en

* Update 2023-08-14-rxnorm_giant_pipeline_en.md

* Add model 2023-08-14-rxnorm_resolver_pipeline_en

* Update 2023-08-14-rxnorm_resolver_pipeline_en.md

* Add model 2023-08-14-snomed_giant_pipeline_en

* Update 2023-08-14-snomed_giant_pipeline_en.md

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Co-authored-by: Meryem1425 <vildansarikaya25@gmail.com>
Co-authored-by: Vildan <64216738+Meryem1425@users.noreply.github.com>
* Add model 2023-08-16-abbreviation_pipeline_en

* Update 2023-08-16-abbreviation_pipeline_en.md

* Add model 2023-08-16-icd10cm_multi_mapper_pipeline_en

* Update 2023-08-16-icd10cm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_multi_mapper_pipeline_en

* Update 2023-08-16-rxnorm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_resolver_pipeline_en

* Update 2023-08-16-rxnorm_resolver_pipeline_en.md

* Add model 2023-08-16-snomed_multi_mapper_pipeline_en

* Update 2023-08-16-snomed_multi_mapper_pipeline_en.md

---------

Co-authored-by: Meryem1425 <vildansarikaya25@gmail.com>
Co-authored-by: Vildan <64216738+Meryem1425@users.noreply.github.com>
* Add model 2023-08-16-abbreviation_pipeline_en

* Update 2023-08-16-abbreviation_pipeline_en.md

* Add model 2023-08-16-icd10cm_multi_mapper_pipeline_en

* Update 2023-08-16-icd10cm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_multi_mapper_pipeline_en

* Update 2023-08-16-rxnorm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_resolver_pipeline_en

* Update 2023-08-16-rxnorm_resolver_pipeline_en.md

* Add model 2023-08-16-snomed_multi_mapper_pipeline_en

* Update 2023-08-16-snomed_multi_mapper_pipeline_en.md

---------

Co-authored-by: SKocer <samedkocer22@gmail.com>
Co-authored-by: Vildan <64216738+Meryem1425@users.noreply.github.com>
* Add model 2023-08-16-abbreviation_pipeline_en

* Update 2023-08-16-abbreviation_pipeline_en.md

* Add model 2023-08-16-icd10cm_multi_mapper_pipeline_en

* Update 2023-08-16-icd10cm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_multi_mapper_pipeline_en

* Update 2023-08-16-rxnorm_multi_mapper_pipeline_en.md

* Add model 2023-08-16-rxnorm_resolver_pipeline_en

* Update 2023-08-16-rxnorm_resolver_pipeline_en.md

* Add model 2023-08-16-snomed_multi_mapper_pipeline_en

* Update 2023-08-16-snomed_multi_mapper_pipeline_en.md

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Co-authored-by: gokhanturer <mgturer@gmail.com>
Co-authored-by: Vildan <64216738+Meryem1425@users.noreply.github.com>
* Add model 2023-08-16-bert_sequence_classifier_age_group_en

* Add model 2023-08-16-genericclassifier_age_group_sbiobert_cased_mli_en

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Co-authored-by: gpirge <gursev.pirge@gmail.com>
* Add model 2023-08-13-assertion_sdoh_wip_en

* Add model 2023-08-13-genericclassifier_sdoh_transportation_insecurity_sbiobert_cased_mli_en

* Add model 2023-08-13-genericclassifier_sdoh_transportation_insecurity_e5_large_en

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Co-authored-by: hsaglamlar <hsaglamlar@gmail.com>
* Add model 2023-08-16-ner_clinical_pt

* Update 2023-08-16-ner_clinical_pt.md

* Update 2023-08-16-ner_clinical_pt.md

---------

Co-authored-by: Meryem1425 <vildansarikaya25@gmail.com>
Co-authored-by: Vildan <64216738+Meryem1425@users.noreply.github.com>
Co-authored-by: Cabir C <64752006+Cabir40@users.noreply.github.com>
* Add model 2023-08-17-clinical_notes_qa_base_onnx_en

* Add model 2023-08-17-clinical_notes_qa_large_onnx_en

* Update 2023-08-17-clinical_notes_qa_base_onnx_en.md

---------

Co-authored-by: Cabir40 <cabir4006@gmail.com>
Co-authored-by: Cabir C <64752006+Cabir40@users.noreply.github.com>
* Add model 2023-08-17-few_shot_classifier_age_group_sbiobert_cased_mli_en

* fixed typos

* Add model 2023-08-17-assertion_vop_3cl_emb_clinical_en

* Update 2023-08-17-assertion_vop_3cl_emb_clinical_en.md

* Add model 2023-08-17-assertion_vop_3cl_emb_clinical_medium_en

* Add model 2023-08-17-assertion_vop_3cl_emb_clinical_large_en

* Update 2023-08-17-assertion_vop_3cl_emb_clinical_en.md

* Update 2023-08-17-assertion_vop_3cl_emb_clinical_medium_en.md

* Update 2023-08-17-assertion_vop_3cl_emb_clinical_large_en.md

---------

Co-authored-by: gpirge <gursev.pirge@gmail.com>
Co-authored-by: Cabir C <64752006+Cabir40@users.noreply.github.com>
Co-authored-by: gursev.pirge <67619330+gpirge@users.noreply.github.com>
Co-authored-by: Meryem1425 <vildansarikaya25@gmail.com>
@aymanechilah aymanechilah changed the title Classification model uom Classification model for dicom files Aug 23, 2023
@C-K-Loan C-K-Loan merged commit ee34e79 into models_hub_ocr Aug 23, 2023
@Cabir40 Cabir40 deleted the 2023-08-22-visualclf_vit_dicom_en_UxlzCKMPQmYr6xRSxr_9G1Oe branch September 19, 2023 11:43
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