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Merge pull request #303 from realmarcin/master
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fixed synonym truncations
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@justaddcoffee
justaddcoffee committed Jul 31, 2020
2 parents 9f85c23 + 49adc84 commit cb01477
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions curated/ORFs/uniprot_sars-cov-2.gpi
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Expand Up @@ -59,7 +59,7 @@ UniProtKB P0DTC8 ORF8 ORF8 UniProtKB:P0DTC8, 16-121|ORF8/SigPep- (SARS2)|ORF8 pr
UniProtKB P0DTC9 N protein Nucleoprotein NC|Protein N|P0DTC9(1-419)|N|NC (SARS2)|N (SARS2)|PRO_0000449656|nucleocapsid protein (SARS2)|protein N (SARS2)|nucleoprotein|Nucleoprotein (N)|Nucleocapsid protein|nucleocapsid gene|nucleocapsid protein (N) protein taxon:2697049 PR:P0DTC9
UniProtKB P0DTD1 pp1ab Replicase polyprotein 1ab rep|1a-1b|ORF1ab|ORF1ab/ClvPrd (SARS2)|ORF1ab proteolytic cleavage product protein taxon:2697049 PR:P0DTD1-1
UniProtKB P0DTD1-PRO_0000449619 nsp1 Host translation inhibitor nsp1 nsp1|P0DTD1(1-180)|rep/Clv:nsp1 (SARS2)|PRO_0000449619|nsp1 (SARS2)|UniProtKB:P0DTD1, 1-180|PRO_0000449635|leader protein (SARS2)|UniProtKB:P0DTC1, 1-180|non-structural protein 1 (SARS2)|nsp-1|ns1|ns-1|host translation inhibitor nsp1|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 1 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050270|UniProtKB:P0DTD1-PRO_0000449635
UniProtKB P0DTD1-PRO_0000449620 nsp2 Non-structural protein 2 P0DTD1(181-818)|UniProtKB:P0DTC1, 181-818|UniProtKB:P0DTD1, 181-818|p65 homolog (SARS2)|PRO_0000449636|nsp2 (SARS2)|rep/Clv:nsp2 (SARS2)|PRO_0000449620|Non-structural protein 2|nsp-2|nsp2|ns2|ns-2|Severe acute respiratory syndrome (SARS) coronavirus protein taxon:2697049 UniProtKB:P0DTD1 PR:000050271|UniProtKB:P0DTD1-PRO_0000449636
UniProtKB P0DTD1-PRO_0000449620 nsp2 Non-structural protein 2 P0DTD1(181-818)|UniProtKB:P0DTC1, 181-818|UniProtKB:P0DTD1, 181-818|p65 homolog (SARS2)|PRO_0000449636|nsp2 (SARS2)|rep/Clv:nsp2 (SARS2)|PRO_0000449620|Non-structural protein 2|nsp-2|nsp2|ns2|ns-2|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 2 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050271|UniProtKB:P0DTD1-PRO_0000449636
UniProtKB P0DTD1-PRO_0000449621 nsp3 Non-structural protein 3 PL-PRO|P0DTD1(819-2763)|UniProtKB:P0DTD1, 819-2763|PLpro (SARS2)|nsp3 (SARS2)|rep/Clv:nsp3 (SARS2)|main proteinase (SARS2)|papain-like proteinase (SARS2)|UniProtKB:P0DTC1, 819-2763|PRO_0000449621|PRO_0000449637|Non-structural protein 3|nsp-3|nsp3|ns3|ns-3|Papain-like proteinase|Papain-like protease|Papain-like protease 2|Papain-like proteinase 2|PL-PRO|PL2-PRO|PL2pro|PLpro|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 3 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050272|UniProtKB:P0DTD1-PRO_0000449637
UniProtKB P0DTD1-PRO_0000449622 nsp4 Non-structural protein 4 nsp4|P0DTD1(2764-3263)|RO_0000449638|rep/Clv:nsp4 (SARS2)|UniProtKB:P0DTC1, 2764-3263|PRO_0000449622|nsp4 (SARS2)|UniProtKB:P0DTD1, 2764-3263|Non-structural protein 4|nsp-4|nsp4|ns4|ns-4|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 4 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050273|UniProtKB:P0DTD1-PRO_0000449638
UniProtKB P0DTD1-PRO_0000449623 nsp5 3C-like proteinase nsp5|3CL-PRO|3CLp|Mpro|P0DTD1(3264-3569)|UniProtKB:P0DTD1, 3264-3569|3CLpro (SARS2)|PRO_0000449623|PRO_0000449639|UniProtKB:P0DTC1, 3264-3569|nsp5 (SARS2)|3CL-PRO (SARS2)|picornavirus 3C-like protease (SARS2)|rep/Clv:nsp5 (SARS2)|3CLp (SARS2)|3C-like protease|3C-like proteinase|3CL pro proteinase|3CL-PRO|3CLp|3CLpro|SARS-3CL pro|SARS-3CL pro proteinase|SARS-3CLpro|proteinase 3CL pro|3-chymotrypsin-like protease (3CLpro)|3-chymotrypsin-like protease|chymotrypsin-like protease|chymotrypsin-like cysteine protease|Non-structural protein 5|nsp-5|nsp5|ns5|ns-5|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 5|M pro|main protease|main proteinase|Mpro|SARS coronavirus main proteinase protein taxon:2697049 UniProtKB:P0DTD1 PR:000050274|UniProtKB:P0DTD1-PRO_0000449639
Expand All @@ -70,9 +70,9 @@ UniProtKB P0DTD1-PRO_0000449627 nsp9 Non-structural protein 9 P0DTD1(4141-4253)|
UniProtKB P0DTD1-PRO_0000449628 nsp10 Non-structural protein 10 GFL|P0DTD1(4254-4392)|rep/Clv:nsp10 (SARS2)|UniProtKB:P0DTD1, 4254-4392|UniProtKB:P0DTC1, 4254-4392|growth factor-like peptide (SARS2)|PRO_0000449628|PRO_0000449644|nsp10 (SARS2)|GFL (SARS2)|Non-structural protein 10|nsp-10|nsp10|ns10|ns-10|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 10 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050279|UniProtKB:P0DTD1-PRO_0000449644
UniProtKB P0DTD1-PRO_0000449629 nsp12 RNA-directed RNA polymerase Pol|RdRp|P0DTD1(4393-5324)|Pol (SARS2)|PRO_0000449629|RdRp (SARS2)|nsp12 (SARS2)|UniProtKB:P0DTD1, 4393-5324|ORF1ab/Clv:nsp12 (SARS2)|Non-structural protein 12|nsp-12|nsp12|ns12|ns-12|RNA-dependent RNA polymerase|RNA-directed RNA polymerase|RdRp|Pol|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 12 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050284
UniProtKB P0DTD1-PRO_0000449630 nsp13 Helicase Hel|P0DTD1(5325-5925)|UniProtKB:P0DTD1, 5325-5925|ORF1ab/Clv:nsp13 (SARS2)|PRO_0000449630|nsp13 (SARS2)|Hel (SARS2)|Non-structural protein 13|nsp-13|nsp13|ns13|ns-13|helicase|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 13 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050285
UniProtKB P0DTD1-PRO_0000449631 nsp14 Proofreading exoribonuclease ExoN|P0DTD1(5926-6452)|UniProtKB:P0DTD1, 5926-6452|ORF1ab/Clv:nsp14 (SARS2)|nsp14 (SARS2)|ExoN (SARS2)|PRO_0000449631|bifunctional exonuclease/methyltransferase|Non-structural protein 14|nsp-14|nsp14|ns14|ns-14|Severe acute respiratory syndrome (SARS) coronavirus protein taxon:2697049 UniProtKB:P0DTD1 PR:000050286
UniProtKB P0DTD1-PRO_0000449631 nsp14 Proofreading exoribonuclease ExoN|P0DTD1(5926-6452)|UniProtKB:P0DTD1, 5926-6452|ORF1ab/Clv:nsp14 (SARS2)|nsp14 (SARS2)|ExoN (SARS2)|PRO_0000449631|bifunctional exonuclease/methyltransferase|Non-structural protein 14|nsp-14|nsp14|ns14|ns-14|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 14 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050286
UniProtKB P0DTD1-PRO_0000449632 nsp15 Uridylate-specific endoribonuclease P0DTD1(6453-6798)|nsp15 (SARS2)|NendoU (SARS2)|ORF1ab/Clv:nsp15 (SARS2)|PRO_0000449632|UniProtKB:P0DTD1, 6453-6798|endoRNAse (SARS2)|Non-structural protein 15|nsp-15|nsp15|ns15|ns-15|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 15|uridylate-specific endoribonuclease protein taxon:2697049 UniProtKB:P0DTD1 PR:000050287
UniProtKB P0DTD1-PRO_0000449633 nsp16 2'-O-methyltransferase P0DTD1(6799-7096)|2'-O-methyltransferase|nsp16 (SARS2)|2'-O-ribose methyltransferase (SARS2)|UniProtKB:P0DTD1, 6799-7096|PRO_0000449633|ORF1ab/Clv:nsp16 (SARS2)|Non-structural protein 16|nsp-16|nsp16|ns16|ns-16|Severe acute respiratory syndrome (SARS) coronavirus protein taxon:2697049 UniProtKB:P0DTD1 PR:000050288
UniProtKB P0DTD1-PRO_0000449633 nsp16 2'-O-methyltransferase P0DTD1(6799-7096)|2'-O-methyltransferase|nsp16 (SARS2)|2'-O-ribose methyltransferase (SARS2)|UniProtKB:P0DTD1, 6799-7096|PRO_0000449633|ORF1ab/Clv:nsp16 (SARS2)|Non-structural protein 16|nsp-16|nsp16|ns16|ns-16|Severe acute respiratory syndrome (SARS) coronavirus nonstructural protein 16 protein taxon:2697049 UniProtKB:P0DTD1 PR:000050288
UniProtKB P0DTD2 ORF9b accessory protein 9b ORF9b|ORF-9b|PRO_0000449657|accessory protein 9b (SARS2)|ORF-9b (SARS2)|ORF9b (SARS2)|P0DTD2|Protein 9b|Accessory protein 9b|ORF-9b|9b protein|9b accessory gene|9b accessory protein|9b protein taxon:2697049 PR:P0DTD2
UniProtKB P0DTD3 ORF14 Uncharacterized protein 14 ORF14 (SARS2)|P0DTD3|PRO_0000449658|Uncharacterized protein 14|ORF14|ORF-14 protein taxon:2697049 PR:P0DTD3
UniProtKB P0DTD8 ORF7b Accessory protein 7b ORF7b|ns7b|ns7b (SARS2)|accessory protein 7b (SARS2)|ORF7b (SARS2)|ORF 7b|PRO_0000449799|P0DTD8|protein 7b|ns7b|ns-7b|Accessory protein 7b|7b protein taxon:2697049 PR:P0DTD8

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