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README.md

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ACCEPT

The ACCEPT Software is an image analysis package for the Automated CTC Classification, Enumeration and PhenoTyping.
It is currently under active development for the EU Cancer-ID project.

Current Features:

  • CTC Marker Characterization to quantify the expression of markers on pre-scored CTCs
  • CTC Full Detection tool in which all events in the images are segmented and can be analyzed

Installation:

Download the latest installer for Mac or Windows here.
Alternatively, execute ACCEPT.m with Matlab 2016b after downloading and extracting the latest release.

Documentation:

Documentation such as a manual and several use cases can be found on this Wiki.

Bugs:

If you encounter any bugs, have a suggestion or improvement please open a Issue here.

License:

GNU General Public License, Version 3. The license file can be found here.

Funding:

This project is funded by the EU IMI project # 115749-1 CANCER-ID.

Citation:

If you use the software please cite: Zeune L, van Dalum G, Decraene C, Proudhon C, Fehm T, Neubauer H, et al. (2017) Quantifying HER-2 expression on circulating tumor cells by ACCEPT. PLoS ONE12(10): e0186562.

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