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PyQTST is a software package for calculating chemical reaction rate constant by using transition state theory, which is written by Python3. It provides transition state theory calculation for mono-molecular and bi-molecular reactions, and also provides Skodje-Truhlar method to calculate one-dimensional quantum tunneling transmission coefficient that will be used in correcting rate constant. An API for Shermo is also provided by PyQTST.
Github Website: https://github.com/Linqiaosong/PyQTST
PyPI Website: https://pypi.org/project/PyQTST
Online Documents: https://github.com/Linqiaosong/PyQTST/wiki
PyQTST Citation: Q. Lin, PyQTST (version), https://github.com/Linqiaosong/PyQTST, (year)
You can install PyQTST by using pip
or pip3
.
such as:
pip install PyQTST
or
pip3 install PyQTST
You can also install PyQTST from Github repo.
such as:
git clone https://github.com/Linqiaosong/PyQTST
cd PyQTST
python setup.py install
Using source code to install is also available.
such as:
tar -zxvf PyQTST-2.*.tar.gz
cd PyQTST-2.*
python setup.py install
Shermo Website: http://sobereva.com/soft/shermo
Shermo Citation: T. Lu, Q. Chen, Shermo: A general code for calculating molecular thermodynamic properties, ChemRxiv (2020), DOI: 10.26434/chemrxiv.12278801
We strongly recommend adding Shermo path to environment variables
.
In Windows System, you can change your environment variables
at Control Panel\System and Security\System
In Linux System, you can adding following codes to ~/.bashrc
export PATH=$PATH:/your/shermo/path
export Shermopath=/your/shermo/path