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A dynamic, graphical environment for exploration of clustered or non-clustered heat map data in a web browser.
Simple graphical builder for Next-Generation Clustered Heat Maps
The MBatch R package and Docker image are designed to help assess and correct for batch effects.
Docker Compose Stack for running Batch Effects Interface
Next-Generation Clustered Heat Maps for Galaxy
A GenePattern Module to view NGCHM in GenePattern Notebook
A GenePattern module to build NGCHM in GenePattern notebook
Use google text-to-speech to narrate an audio track for a video
An R library for creating Next-Generation Clustered Heat Maps (NG-CHM)
Lightweight node.js based web service that provides user authentication against LDAP server (Active Directory / Windows network) credentials and returns a JSON Web Token.
R package wrapped around C++ used to quickly read very large "platform" level matrices from within a ZIP archive
Docker image for running MBatch via RStudio Server
The GSAccess application provides a Java link between the data and the Gene Survey R package
Gene Survey R package - take TCGA Standardized Data and make gene level cross-disease and sometimes cross platform comparisons and evaluations simpler to perform
A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.