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MG-RAST · Jun 15, 2017 · 114f38e · 114f38e
1 parent 32d7ed0
commit 114f38e
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Showing 2 changed files with 15 additions and 1 deletion.
diff --git a/src/MGRAST/lib/resources/inbox.pm b/src/MGRAST/lib/resources/inbox.pm
@@ -435,6 +435,9 @@ sub seq_stats {
     $self->{wf_info}{task_list} = $self->json->encode(\@tasks);
 
     my $job = $self->submit_awe_template($self->{wf_info}, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
+    if ($debug) {
+        $self->return_data($job);
+    }
     $self->add_node_action(undef, $node, $job, 'stats');
 
     # return data
@@ -461,6 +464,9 @@ sub sff_to_fastq {
     $self->{wf_info}{task_list} = $self->json->encode(\@tasks);
 
     my $job = $self->submit_awe_template($self->{wf_info}, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
+    if ($debug) {
+        $self->return_data($job);
+    }
     $self->add_node_action($uuid, undef, $job, 'sff2fastq');
 
     # return data
@@ -505,6 +511,9 @@ sub demultiplex {
     $self->{wf_info}{task_list} = $self->json->encode(\@tasks);
 
     my $job = $self->submit_awe_template($self->{wf_info}, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
+    if ($debug) {
+        $self->return_data($job);
+    }
     $self->add_node_action($seq_file, undef, $job, 'demultiplex');
     $self->add_node_action($bar_norm, undef, $job, 'demultiplex');
     if ($index_file) {
@@ -549,6 +558,9 @@ sub pairjoin {
     $self->{wf_info}{task_list} = $self->json->encode(\@tasks);
 
     my $job = $self->submit_awe_template($self->{wf_info}, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
+    if ($debug) {
+        $self->return_data($job);
+    }
     $self->add_node_action($pair1_file, undef, $job, "pairjoin");
     $self->add_node_action($pair2_file, undef, $job, "pairjoin");
 
@@ -590,6 +602,9 @@ sub pairjoin_demultiplex {
     $self->{wf_info}{task_list} = $self->json->encode(\@tasks);
 
     my $job = $self->submit_awe_template($self->{wf_info}, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
+    if ($debug) {
+        $self->return_data($job);
+    }
     $self->add_node_action($pair1_file, undef, $job, "pairjoin_demultiplex");
     $self->add_node_action($pair2_file, undef, $job, "pairjoin_demultiplex");
     $self->add_node_action($bar_norm, undef, $job, "pairjoin_demultiplex");

diff --git a/src/MGRAST/lib/resources/submission.pm b/src/MGRAST/lib/resources/submission.pm
@@ -727,7 +727,6 @@ sub submit {
         task_list     => $self->json->encode($tasks)
     };
     my $job = $self->submit_awe_template($info, $Conf::mgrast_submission_workflow, $self->token, $self->user_auth, $debug);
-
     $response->{job} = $job;
     $response->{info} = $param_obj;
     $self->return_data($response);