Merge pull request #376 from jaredbischof/master

Excluding seek, length fields when they exceed int range
MG-RAST · Dec 17, 2014 · 43c27ac · 43c27ac
2 parents 997f625 + a8f9772
commit 43c27ac
Showing 1 changed file with 5 additions and 1 deletion.
diff --git a/bin/expanded_sims2overview_no_sort_required_less_memory_used.py b/bin/expanded_sims2overview_no_sort_required_less_memory_used.py
@@ -179,7 +179,11 @@ def print_md5_stats(ohdl, data, imap):
             match = np.where(imap['md5']==md5)
             if len(match[0]) > 0:
                 row = match[0][0]
-                seek, length = str(imap[row][1]), str(imap[row][2])
+                # seek and length must be less than or equal to 2147483647
+                if imap[row][1] <= 2147483647 and imap[row][2] <= 2147483647:
+                    seek, length = str(imap[row][1]), str(imap[row][2])
+                else:
+                    seek, length = '\N', '\N'
         # output
         line = [ DB_VER,
                  JOBID,