New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Downloading databases via dl_database fails #106

Closed

SimpleConjugate opened this issue Feb 18, 2018 · 1 comment

SimpleConjugate commented Feb 18, 2018

When attempting to run

wfdb.dl_database('ahadb', os.getcwd())

The following error is returned

Traceback (most recent call last):
File "", line 1, in
File "/wfdb/io/record.py", line 1365, in dl_database
r = requests.get(dburl)
NameError: global name 'dburl' is not defined

I made a quick fix by changing dburl to download.db_index_url
Which is the correct version?

The text was updated successfully, but these errors were encountered:

kapec94 commented Feb 19, 2018

I confirm the error happens. Code:

wfdb.dl_database('ptbdb', dl_dir='data/',
             records=['patient001/s0010_re'],
             overwrite=False)

Yields:

Traceback (most recent call last):
File "<...>\main.py", line 10, in
overwrite=False)
File "<...>\wfdb\io\record.py", line 1365, in dl_database
r = requests.get(dburl)
NameError: name 'dburl' is not defined

cx1111 closed this as completed in

tompollard added a commit that referenced this issue


          build(deps): bump readthedocs-sphinx-search from 0.1.1 to 0.3.2 in /d…

05b3fde

…ocs (#477)

Bumps
[readthedocs-sphinx-search](https://github.com/readthedocs/readthedocs-sphinx-search)
from 0.1.1 to 0.3.2.
<details>
<summary>Changelog</summary>
<p><em>Sourced from <a
href="https://github.com/readthedocs/readthedocs-sphinx-search/blob/main/CHANGELOG.rst">readthedocs-sphinx-search's
changelog</a>.</em></p>
<blockquote>
<h2>Version 0.3.2</h2>
<p>:Date: Jan 15, 2024</p>
<ul>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>:
Security fix, more information in <code>GHSA-xgfm-fjx6-62mj
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/security/advisories/GHSA-xgfm-fjx6-62mj&gt;</code>__.</li>
</ul>
<h2>Version 0.3.1</h2>
<p>:Date: Mar 27, 2023</p>
<ul>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>: Add
missing static file (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/135">#135</a>)</li>
</ul>
<h2>Version 0.3.0</h2>
<p>:Date: Mar 27, 2023</p>
<ul>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>: Use
the search API V3 and add support for custom filters (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/132">#132</a>)</li>
</ul>
<h2>Version 0.2.0</h2>
<p>:Date: Jan 24, 2023</p>
<p>This version adds support for sphinx 6.x,
and makes JQuery optional for animations.</p>
<ul>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>: CI:
fix tests (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/127">#127</a>)</li>
<li><a
href="https://github.com/dependabot"><code>@dependabot</code></a>[bot]:
Bump decode-uri-component from 0.2.0 to 0.2.2 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/120">#120</a>)</li>
<li><a
href="https://github.com/dependabot"><code>@dependabot</code></a>[bot]:
Bump minimatch and gulp (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/119">#119</a>)</li>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>:
Refactor: don't depend on underscore.js (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/116">#116</a>)</li>
<li><a href="https://github.com/stsewd"><code>@stsewd</code></a>:
Remove usage of jquery (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/115">#115</a>)</li>
</ul>
<h2>Version 0.1.2</h2>
<p>:Date: May 11, 2022</p>
<ul>
<li><code>@ericholscher
&lt;https://github.com/ericholscher&gt;</code><strong>: Improve SEO of
README &amp; docs index
(<code>[#111](readthedocs/readthedocs-sphinx-search#111)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/111&gt;</code></strong>)</li>
<li><code>@dependabot[bot]
&lt;https://github.com/dependabot[bot]&gt;</code><strong>: Bump moment
from 2.29.1 to 2.29.2
(<code>[#110](readthedocs/readthedocs-sphinx-search#110)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/110&gt;</code></strong>)</li>
<li><code>@stsewd &lt;https://github.com/stsewd&gt;</code><strong>: Test
with sphinx 4 and python 3.10
(<code>[#109](readthedocs/readthedocs-sphinx-search#109)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/109&gt;</code></strong>)</li>
<li><code>@stsewd &lt;https://github.com/stsewd&gt;</code><strong>: Add
sphinx metadata
(<code>[#108](readthedocs/readthedocs-sphinx-search#108)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/108&gt;</code></strong>)</li>
<li><code>@dependabot[bot]
&lt;https://github.com/dependabot[bot]&gt;</code><strong>: Bump minimist
from 1.2.5 to 1.2.6
(<code>[#107](readthedocs/readthedocs-sphinx-search#107)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/107&gt;</code></strong>)</li>
<li><code>@stsewd &lt;https://github.com/stsewd&gt;</code><strong>:
Rename master -&gt; main
(<code>[#106](readthedocs/readthedocs-sphinx-search#106)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/106&gt;</code></strong>)</li>
<li><code>@stsewd &lt;https://github.com/stsewd&gt;</code><strong>:
Docs: use sphinx 4.x
(<code>[#105](readthedocs/readthedocs-sphinx-search#105)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/105&gt;</code></strong>)</li>
<li><code>@astrojuanlu
&lt;https://github.com/astrojuanlu&gt;</code><strong>: Fix docs
(<code>[#102](readthedocs/readthedocs-sphinx-search#102)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/102&gt;</code></strong>)</li>
<li><code>@dependabot[bot]
&lt;https://github.com/dependabot[bot]&gt;</code><strong>: Bump postcss
from 7.0.35 to 7.0.39
(<code>[#100](readthedocs/readthedocs-sphinx-search#100)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/100&gt;</code></strong>)</li>
<li><code>@dependabot[bot]
&lt;https://github.com/dependabot[bot]&gt;</code><strong>: Bump
path-parse from 1.0.6 to 1.0.7
(<code>[#99](readthedocs/readthedocs-sphinx-search#99)
&lt;https://github.com/readthedocs/readthedocs-sphinx-search/pull/99&gt;</code></strong>)</li>
</ul>
</blockquote>
</details>
<details>
<summary>Commits</summary>
<ul>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/c485b81f6015e4867bb01e600d031dc402500b39"><code>c485b81</code></a>
Release 0.3.2</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/8c6f6d01e88e72ef32ed0c220b6c19d1e1121c73"><code>8c6f6d0</code></a>
Merge pull request from GHSA-xgfm-fjx6-62mj</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/1608743622df0883b785a2ce07c587f146f2102b"><code>1608743</code></a>
Release 0.3.1 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/136">#136</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/25673a35b661a6a5dbc82d26c44998028dd61cc0"><code>25673a3</code></a>
Release 0.3.0 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/135">#135</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/ca36a1566296fe79926e838d9771ec0b7a1a27a8"><code>ca36a15</code></a>
Use API V3 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/132">#132</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/c8cb91264db65ff64f93d9cdf95eec75159f2ea1"><code>c8cb912</code></a>
Release 0.2.0 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/128">#128</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/5432999e4689970f22275c833aa65e41e4f8b1e3"><code>5432999</code></a>
CI: fix tests (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/127">#127</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/fa7e607f98bd697f9b4b6af6d3cd7de6d5e39117"><code>fa7e607</code></a>
Bump decode-uri-component from 0.2.0 to 0.2.2 (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/120">#120</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/225353f6be04f2fa178ec2350e3c27599b6b2ea1"><code>225353f</code></a>
Refactor: don't depend on underscore.js (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/116">#116</a>)</li>
<li><a
href="https://github.com/readthedocs/readthedocs-sphinx-search/commit/5880a64bc514fef99a083c40f2dadc3e939cdc88"><code>5880a64</code></a>
Remove usage of jquery (<a
href="https://redirect.github.com/readthedocs/readthedocs-sphinx-search/issues/115">#115</a>)</li>
<li>Additional commits viewable in <a
href="https://github.com/readthedocs/readthedocs-sphinx-search/compare/0.1.1...0.3.2">compare
view</a></li>
</ul>
</details>
<br />


[![Dependabot compatibility
score](https://dependabot-badges.githubapp.com/badges/compatibility_score?dependency-name=readthedocs-sphinx-search&package-manager=pip&previous-version=0.1.1&new-version=0.3.2)](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores)

Dependabot will resolve any conflicts with this PR as long as you don't
alter it yourself. You can also trigger a rebase manually by commenting
`@dependabot rebase`.

[//]: # (dependabot-automerge-start)
[//]: # (dependabot-automerge-end)

---

<details>
<summary>Dependabot commands and options</summary>
<br />

You can trigger Dependabot actions by commenting on this PR:
- `@dependabot rebase` will rebase this PR
- `@dependabot recreate` will recreate this PR, overwriting any edits
that have been made to it
- `@dependabot merge` will merge this PR after your CI passes on it
- `@dependabot squash and merge` will squash and merge this PR after
your CI passes on it
- `@dependabot cancel merge` will cancel a previously requested merge
and block automerging
- `@dependabot reopen` will reopen this PR if it is closed
- `@dependabot close` will close this PR and stop Dependabot recreating
it. You can achieve the same result by closing it manually
- `@dependabot show <dependency name> ignore conditions` will show all
of the ignore conditions of the specified dependency
- `@dependabot ignore this major version` will close this PR and stop
Dependabot creating any more for this major version (unless you reopen
the PR or upgrade to it yourself)
- `@dependabot ignore this minor version` will close this PR and stop
Dependabot creating any more for this minor version (unless you reopen
the PR or upgrade to it yourself)
- `@dependabot ignore this dependency` will close this PR and stop
Dependabot creating any more for this dependency (unless you reopen the
PR or upgrade to it yourself)
You can disable automated security fix PRs for this repo from the
[Security Alerts
page](https://github.com/MIT-LCP/wfdb-python/network/alerts).

</details>

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment