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Releases: MLHale/funset-enrichment-visualization

The light of day

19 Jan 23:40
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The light of day

Now, however, if someone, using force, were to pull him [who had been freed from his chains] away from there and to drag him up the cave's rough and steep ascent and not to let go of him until he had dragged him out into the light of the sun...

...would not the one who had been dragged like this feel, in the process, pain and rage? And when he got into the sunlight, wouldn't his eyes be filled with the glare, and wouldn't he thus be unable to see any of the things that are now revealed to him as the unhidden?

Latest patch notes:

Backend server:

  • the "runs/invoke" endpoint now loads "namespace" as a POST parameter and selects the appropriate organism/namespace background and annotation file accordingly in the data pipeline
  • (dario) C++ code no longer produces an empty file if there is no enrichment set
  • the messages generated on error conditions have been updated to better inform the user

Client App:

  • a field has been added to the client app to allow users to select a namespace
  • example data no longer pre-populates fields
  • a clickable button has been added on the landing page to pre-populate fields with example data
  • example data has been changed to the new example provided by Ishwor
  • the clustering UI has been reworked to no longer auto update
    • an update button now must be clicked to update clusters
    • the number of visible clusters is now shown above the cluster inspector panel
  • the app will no longer visually get stuck displaying "Fetching data..."
  • "Fetching data" has been replaced with more informative messages
  • error messages generated by the backend are now displayed during the fetching process along with a link for the user to return to their query
  • text labels now properly have their opacity reduced when viewing a particular cluster
  • names throughout the app have been changed from "Pathway Visualization" to "Funset"

General:

  • the app is now hosted at "funset.mlhale.com"
  • the DNS name "pathwayviz.mlhale.com" now permanently redirects to "funset.mlhale.com"