Covid-19 Biomarker Discovery

A project about biomarker discovery for COVID-19 research.

Literature annotator

Automatically annotate scientific literature using the BioPortal Annotator.

cd literature-annotator

Start a JupyterLab locally from the literature-annotator folder:

docker run --rm -it -p 8888:8888 -e BIOPORTAL_APIKEY=<YOUR_BIOPORTAL_APIKEY> -v $(pwd):/notebooks -e PASSWORD="<your_secret>" umids/jupyterlab:latest