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MathMalaria

Math against malaria

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  1. COVID19_Spatial_Model COVID19_Spatial_Model Public

    This repository contains the implementation of the model described in the paper "Predicting the impact of COVID-19 vaccination campaigns - a flexible age-dependent spatially-stratified predictive m…

    Julia 4 2

  2. COVID19_LTCFs COVID19_LTCFs Public

    Model used for the simulations in the paper ``Preventing COVID-19 spread in closed facilities by regular testing of employees – an efficient intervention in long-term care facilities and prisons?´´…

    Python

  3. COVID19_ADE_Model COVID19_ADE_Model Public

    Python

  4. MultipleExposuresCOVID19 MultipleExposuresCOVID19 Public

    Code for

    Python

  5. MOI-Bias-correction MOI-Bias-correction Public

    Repository of R functions used to derive results for the paper: "Bias-corrected maximum-likelihood estimation of multiplicity of infection and lineage frequencies".

    R

  6. MultiLociBiallelicModel MultiLociBiallelicModel Public

    This repository contains the scripts of the model described in the manuscript 'A maximum-likelihood method to estimate haplotype frequencies and prevalence alongside multiplicity of infection from …

    R

Repositories

Showing 8 of 8 repositories
  • MOI-Bias-correction Public

    Repository of R functions used to derive results for the paper: "Bias-corrected maximum-likelihood estimation of multiplicity of infection and lineage frequencies".

    Maths-against-Malaria/MOI-Bias-correction’s past year of commit activity
    R 0 0 0 0 Updated Nov 27, 2023
  • MultiAllelicBiLociModel Public
    Maths-against-Malaria/MultiAllelicBiLociModel’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 28, 2023
  • Ebola Public

    Predicting the combined effects of case isolation, safe funeral practices, and contact tracing during Ebola virus disease outbreaks

    Maths-against-Malaria/Ebola’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 24, 2022
  • MultipleExposuresCOVID19 Public

    Code for

    Maths-against-Malaria/MultipleExposuresCOVID19’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 22, 2022
  • COVID19_Spatial_Model Public

    This repository contains the implementation of the model described in the paper "Predicting the impact of COVID-19 vaccination campaigns - a flexible age-dependent spatially-stratified predictive model, accounting for multiple viral variants and vaccines".

    Maths-against-Malaria/COVID19_Spatial_Model’s past year of commit activity
    Julia 4 MIT 2 0 0 Updated Oct 20, 2022
  • MultiLociBiallelicModel Public

    This repository contains the scripts of the model described in the manuscript 'A maximum-likelihood method to estimate haplotype frequencies and prevalence alongside multiplicity of infection from SNP data'.

    Maths-against-Malaria/MultiLociBiallelicModel’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 4, 2022
  • COVID19_ADE_Model Public
    Maths-against-Malaria/COVID19_ADE_Model’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 1, 2021
  • COVID19_LTCFs Public

    Model used for the simulations in the paper ``Preventing COVID-19 spread in closed facilities by regular testing of employees – an efficient intervention in long-term care facilities and prisons?´´. doi: https://doi.org/10.1101/2020.10.12.20211573

    Maths-against-Malaria/COVID19_LTCFs’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 24, 2021

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