Version 0.2.10
·
78 commits
to master
since this release
- fixed get_overlap - important for correct assignment of mono exonic genes to reference
- added parameter to control for minimal mapping quality in add_sample_from_bam. This allows for filtering out ambiguous reads, which have mapping quality of 0
- fixed plot_diff_result (Key error due to incorrect parsing of group names)
- New function estimate_tpm_threshold, to estimate the minimal abundance level of observable transcripts, given a sequencing depth.
- New function coordination_test, to test coordination of splicing events within a gene.
- Optional log or linear scale for the coverage axis in sashimi plots.