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Predfast is a quick way to produce a protein database then run gradient boosted random forest machine learning on the dataset. This allows for quick and easy enzyme identification.

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Meadowlion/PredFAST

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PredFAST

Predfast is a quick way to produce a protein database then run gradient boosted random forest machine learning on the dataset. This allows for quick and easy enzyme identification.

License Disclaimer The project is Licensed as open source under GPL3.

The project uses some resources directly and are in the Resources Used folder please refer to this and their licenses before using the program!

How To Use PredFAST is designed to be easy to use for Linux/macOS but will work perfectly on Windows with 2 things. One is to set up the folders manually the other is if you want the advantage of using PFAM you have to use HMMSCAN seperately.

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Predfast is a quick way to produce a protein database then run gradient boosted random forest machine learning on the dataset. This allows for quick and easy enzyme identification.

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