GitHub - ModelDBRepository/115357: Generalized Carnevale-Hines algorithm (van Elburg and van Ooyen 2009)

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Generalized Carnevale-Hines algorithm (van Elburg and van Ooyen 2009)

modeldb.science/115357

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
IF4rFigures.hoc		IF4rFigures.hoc
IF4rNetwork.hoc		IF4rNetwork.hoc
intfire4r.mod		intfire4r.mod
mosinit.hoc		mosinit.hoc
readme.html		readme.html
screenshot.jpg		screenshot.jpg

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<html><pre>
This is the readme for the model associated with the paper:

R.A.J. van Elburg and A. van Ooyen, `Generalization of the event-based 
Carnevale-Hines integration scheme for integrate-and-fire models', 
Neural Computation, July 2009, Vol. 21, No. 7: 1913-1930. 
(doi:10.1162/neco.2009.07-08-815 )

Files:

Actual implementation of the generalized IntFire4 mechanism, called
	IntFire4r: intfire4r.mod
	
Hoc-file defining a network of IntFire4r cells: IF4rNetwork.hoc
	
Session files bringing up a little GUI for plotting model behavior in
4 different initial conditions:
	IF4rFigures.hoc

Execution:

After compilation of intfire4r.mod (mknrndll with PC and MAC,
nrnivmodl under linux) run IF4rFigures.hoc in NEURON. This will load
intfire4r cells and bring up a panel with four choices ++,+-,-+,-- and
three graphs. The first+/- indicates whether the model starts with a
positive (+) or negative (-) dm/dt, the second +/- indicates whether
the model starts above (+) or below (-) m=0. The graphs show the
currents e (E), i2 (I) and the membrane potential m (M).

For example running "++" will generate figures such as:

<img src="./screenshot.jpg">
</pre></html>