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Read version info from nf-core/demultiplex version file #57

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merged 6 commits into from
Mar 12, 2024

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Aratz
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@Aratz Aratz commented Mar 8, 2024

This PR adds support for runfolders processed with nf-core/demultiplex instead of arteria-bcl2fastq.

In the current version of snpseq_packs, the version of bcl2fastq is dumped to a file during processing. This won't be needed in the future since all nf-core pipelines collect all software versions in a single file.

@Aratz Aratz self-assigned this Mar 8, 2024
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Looks good! Just had a comment that you can have a look at.

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This is to make it clear that these version come from e.g. the
nf-core/demultiplex pipeline and not the seqreports pipeline.
@Aratz Aratz requested a review from matrulda March 11, 2024 14:34
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Aratz commented Mar 11, 2024

Thanks for the review! Should be fixed now :)

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Great! Just a super minor comment

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@Aratz Aratz merged commit 1375149 into Molmed:main Mar 12, 2024
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2 participants