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Fix channel_axis bug in transforms.py #688

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merged 1 commit into from
Feb 13, 2024
Merged

Fix channel_axis bug in transforms.py #688

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4 changes: 2 additions & 2 deletions cellpose/transforms.py
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Original file line number Diff line number Diff line change
Expand Up @@ -258,7 +258,7 @@ def convert_image(x, channels, channel_axis=None, z_axis=None,
x = x.squeeze()

# put z axis first
if z_axis is not None and x.ndim > 2:
if z_axis is not None and x.ndim > 2 and z_axis != 0:
x = move_axis(x, m_axis=z_axis, first=True)
if channel_axis is not None:
channel_axis += 1
Expand Down Expand Up @@ -770,4 +770,4 @@ def random_rotate_and_resize(X, Y=None, scale_range=1., xy = (224,224),
lbl[n,1] = (-v1 * np.sin(-theta) + v2*np.cos(-theta))
lbl[n,2] = (v1 * np.cos(-theta) + v2*np.sin(-theta))

return imgi, lbl, scale
return imgi, lbl, scale