Incorrectly named function affected other parts of the same method

Multiscale-Genomics · May 9, 2017 · 0e7c894 · 0e7c894
1 parent d185fa5
commit 0e7c894
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tool/bed_indexer.py b/tool/bed_indexer.py
@@ -167,7 +167,7 @@ def bed2hdf5(self, file_id, assembly, file_sorted_bed, file_hdf5):
             dset = grp['data']
             fset = grp['files']
             cset = grp['chromosomes']
-            file_idx  = [f for f in fset if f != '']
+            file_idx  = [fs for fs in fset if fs != '']
             if file_id not in file_idx:
                 file_idx.append(file_id)
                 dset.resize((dset.shape[0], dset.shape[1]+1, MAX_CHROMOSOME_SIZE))