Commits on May 21, 2024

1. Fix error when setting case_control_gwas=true …

   Issue: When setting case_control_gwas = true in the config file, an error
          occurred due to a missing subject_level/gwas.txt file.
   
   Cause: The gwas rule requires subject_level/gwas.txt as input. However,
          the script used by the agg_population_qc_tables rule generates
          this file, but it wasn't listed as an output.
   
   Solution: This commit explicitly adds gwas.txt as an output of the
             agg_population_qc_tables rule, ensuring the gwas rule correctly
             waits for its dependency before execution.

   

   jaamarks committed May 21, 2024
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