fix: add unit to spectra width Bioschemas

NFDI4Chem · May 22, 2024 · 20078e1 · 20078e1
1 parent 702b205
commit 20078e1
Showing 1 changed file with 3 additions and 4 deletions.
diff --git a/app/Http/Controllers/API/Schemas/Bioschemas/BioschemasController.php b/app/Http/Controllers/API/Schemas/Bioschemas/BioschemasController.php
@@ -30,8 +30,8 @@ class BioschemasController extends Controller
      * @param  Illuminate\Http\Request  $request
      * @param  App\Models\User  $username
      * @param  App\Models\Project  $projectName
-     * @param  App\Models\Study  $studyName  Optional
-     * @param  App\Models\Dataset  $datasetName  Optional
+     * @param  App\Models\Study  $studyName Optional
+     * @param  App\Models\Dataset  $datasetName Optional
      * @return object
      */
     /**
@@ -281,7 +281,6 @@ public function prepareExperiment($dataset)
                         $experiment = 'c13';
                     }
                 }
-
                 if ($experiment == 'proton') {
                     $experimentSchema = BioschemasHelper::prepareDefinedTerm('1H nuclear magnetic resonance spectroscopy', ['1H-NMR spectrometry', 'proton nuclear magnetic resonance spectroscopy', '1H-NMR spectroscopy', '1H-NMR', '1H NMR', '1H NMR spectroscopy', '1H nuclear magnetic resonance spectrometry', 'proton NMR'], 'CHMO:0000593', 'http://purl.obolibrary.org/obo/CHMO_0000593', $chmo);
                 } elseif ($experiment == 'c13') {
@@ -384,7 +383,7 @@ public function prepareNMRiumInfo($dataset)
             $fieldStrengthProperty = BioschemasHelper::preparePropertyValue('magnetic field strength', 'MR:1400253', $fieldStrength, 'http://purl.obolibrary.org/obo/UO_0000228');
             $numberOfScansProperty = BioschemasHelper::preparePropertyValue('number of scans', 'NMR:1400087', $numberOfScans, 'scans');
             $pulseSequenceProperty = BioschemasHelper::preparePropertyValue('nuclear magnetic resonance pulse sequence', 'CHMO:0001841', $pulseSequence, null);
-            $spectralWidthProperty = BioschemasHelper::preparePropertyValue('Spectral Width', 'NCIT:C156496', $spectralWidth, null); //todo: add unit
+            $spectralWidthProperty = BioschemasHelper::preparePropertyValue('Spectral Width', 'NCIT:C156496', $spectralWidth, 'http://purl.obolibrary.org/obo/UO_0000169');
             $numberOfPointsProperty = BioschemasHelper::preparePropertyValue('number of data points', 'NMR:1000176', $numberOfPoints, 'points');
             $relaxationTimeProperty = BioschemasHelper::preparePropertyValue('relaxation time measurement', 'FIX:0000202', $relaxationTime, 'http://purl.obolibrary.org/obo/UO_0000010');