Change YAML and add jjob CTest for new "atmensanlfv3inc" job in Global Workflow

[DavidNew-NOAA]

This PR is a companion to Global Workflow PR #2593, which adds the "atmensanlfv3inc" job to Global Workflow. That job converts the JEDI ensemble increments into FV3 readable increments. This JCB-GDAS companion PR is #3, which updates the input YAMLs for the FV3 increment converter

This PR does two things:

1. It adds a jjob CTest to GDASApp to test this new job.
2. It modifies the LETKF input YAML to write out cubed-sphere history increments, rather than Gaussian increments, so the FV3 increment converter can read the resulting increment off the native grid and then itself write out a Gaussian increment.

[RussTreadon-NOAA]

Orion test
Install GDASApp feature/atmensanlfv3inc inside g-w DavidNew-NOAA:feature/atmensanlfv3inc. Execute ctest -R test_gdasapp. 5 out of 46 tests fail. The failed tests are

        1762 - test_gdasapp_soca_JGDAS_GLOBAL_OCEAN_ANALYSIS_POST (Failed)
        1778 - test_gdasapp_atm_jjob_ens_init (Failed)
        1779 - test_gdasapp_atm_jjob_ens_run (Failed)
        1780 - test_gdasapp_atm_jjob_ens_inc (Failed)
        1781 - test_gdasapp_atm_jjob_ens_final (Failed)

I did not check test_gdasapp_soca_JGDAS_GLOBAL_OCEAN_ANALYSIS_POST Job test_gdasapp_atm_jjob_ens_init failed with

jinja2.exceptions.TemplateNotFound: output_ensemble_increments_cubed_sphere.yaml.j2

Does this PR require changes in jcb-algorithms or jcb-gdas?

[RussTreadon-NOAA]

Oops, I see this PR was just merged into develop. Apologies that I didn't get to this until today.

[CoryMartin-NOAA]

I think it needs changes in global workflow, @RussTreadon-NOAA. @DavidNew-NOAA has a PR open there that this depends on. NOAA-EMC/global-workflow#2592

[CoryMartin-NOAA]

However, I see we need to update the hash of jcb-gdas, so I need to revert this. MY bad for hitting the trigger too quickly.

[CoryMartin-NOAA]

I'll open a quick PR to update the JCB hash

[DavidNew-NOAA]

Thanks

[RussTreadon-NOAA]

Yes, we need the jcb-gdas hash. It contains the missing template.

[RussTreadon-NOAA]

Closing this thread.

Update Orion working copy of gdas.cd to develop at 6742ec6. This is the commit which brought in GDASApp PR #1108. This PR updated the jcb-gdas hash. Rerun ctest -R test_gdasapp_atm_jjob_ens. All four jobs pass.

Test project /work2/noaa/da/rtreadon/git/global-workflow/fv3inc/sorc/gdas.cd/build
    Start 1778: test_gdasapp_atm_jjob_ens_init
1/4 Test #1778: test_gdasapp_atm_jjob_ens_init ....   Passed   43.75 sec
    Start 1779: test_gdasapp_atm_jjob_ens_run
2/4 Test #1779: test_gdasapp_atm_jjob_ens_run .....   Passed  490.27 sec
    Start 1780: test_gdasapp_atm_jjob_ens_inc
3/4 Test #1780: test_gdasapp_atm_jjob_ens_inc .....   Passed  138.18 sec
    Start 1781: test_gdasapp_atm_jjob_ens_final
4/4 Test #1781: test_gdasapp_atm_jjob_ens_final ...   Passed   42.14 sec

100% tests passed, 0 tests failed out of 4

Total Test time (real) = 714.82 sec