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Add GDASapp (first wave of JEDI changes) #871

Merged
merged 67 commits into from
Jul 22, 2022
Merged

Add GDASapp (first wave of JEDI changes) #871

merged 67 commits into from
Jul 22, 2022

Commits on Dec 15, 2021

  1. Issue #529: add ufsda to checkout, build, and link

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Dec 15, 2021
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Commits on Dec 20, 2021

  1. Issue #529: merge branch develop at 033b1d8 into feature/ufsda

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Dec 20, 2021
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  2. atmanal rocoto job scripts

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 20, 2021
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Commits on Dec 21, 2021

  1. Start of env and parm/config changes for atmanal

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 21, 2021
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Commits on Dec 22, 2021

  1. Changes to parm/config files

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 22, 2021
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  2. Make rocoto jobs all use same j-job for atmanal tasks

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 22, 2021
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  3. start of atmanal config and added to resources

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 22, 2021
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  4. Rename static B template YAML

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 22, 2021
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Commits on Dec 28, 2021

  1. Add APRUN_ATMANAL to ORION env

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 28, 2021
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Commits on Dec 29, 2021

  1. Additional config changes for atmanal

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 29, 2021
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  2. Merge branch 'feature/ufsda-rocoto-jobs' into feature/ufsda-parm

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 29, 2021
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  3. typo/bugfixes

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 29, 2021
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  4. Merge branch 'feature/ufsda-rocoto-jobs' into feature/ufsda-parm

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 29, 2021
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  5. reduce wallclock for atmanalpost to 1 hour

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Dec 29, 2021
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Commits on Jan 3, 2022

  1. change r2d2 vars

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 3, 2022
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  2. make r2d2 exp oper_gdas

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 3, 2022
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  3. Fix for orion env file and add link to j-job

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 3, 2022
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Commits on Jan 4, 2022

  1. Change rocoto job variables

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 4, 2022
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  2. Typo in config.atmanal

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 4, 2022
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  3. config.resources bug

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Jan 4, 2022
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  4. Add link to ufsda directory

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jan 4, 2022
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Commits on Feb 7, 2022

  1. Merge branch 'develop' into feature/ufsda

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Feb 7, 2022
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  2. Issue #521: merge branch 'develop' at 97ebc4d into feature/ufsda-roco… 

    …to-jobs
    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 7, 2022
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  3. Issue #532: merge branch 'develop' at 97ebc4d into feature/ufsda-parm

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 7, 2022
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  4. Merge branch 'feature/ufsda-rocoto-jobs' into feature/ufsda-parm

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 7, 2022
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  5. Issue #529: merge branch 'feature/ufsda-parm' at 74f6f11 into feature… 

    …/ufsda
    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 7, 2022
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  6. replace atmanal with atmanalrun in ORION.env

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 7, 2022
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Commits on Feb 14, 2022

  1. Merge branch 'develop' at f8867d3 into feature/ufsda

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 14, 2022
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Commits on Feb 15, 2022

  1. Issue #521: extend rocoto workflow xml generator to include UFS DA

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 15, 2022
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Commits on Feb 18, 2022

  1. Issue #521 add missing task_prep to setup_workflow.py

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 18, 2022
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  2. Merge branch develop at cb8b5ad into feature/ufsda

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 18, 2022
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Commits on Feb 25, 2022

  1. Merge branch develop at e3d64ab into feature/ufsda

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Feb 25, 2022
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Commits on Mar 18, 2022

  1. Merge branch 'develop' at d758e8b into feature/ufsda

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Mar 18, 2022
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  2. Change UFS-DA to GDASApp

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Mar 18, 2022
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Commits on Apr 14, 2022

  1. Updated build for GDAS

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Apr 14, 2022
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  2. Changes to rocoto scripts

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Apr 14, 2022
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  3. some changes to config.atmanal

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Apr 14, 2022
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Commits on Apr 18, 2022

  1. Changes to link_workflow and temp change to feature branch for gdas

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Apr 18, 2022
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  2. Changes to config files

    @CoryMartin-NOAA
    CoryMartin-NOAA committed Apr 18, 2022
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Commits on Apr 26, 2022

  1. Updates to cycle GDASApp 

     * .gitignore - add GDASApp directories and file
 * env/ORION.env - add sfcanl, add task count to APRUN_ATMANAL
 * jobs/JGLOBAL_ATMOS_SFCANL - new j-job for surface analysis
 * jobs/rocoto/postanl.sh - new rocoto job for analysis only post
 * jobs/rocoto/sfcanl.sh - new rocoto job for surface analysis
 * parm/config/config.base.emc.dyn - replace DO_UFSDA with DO_JEDIVAR
 * parm/config/config.base.nco.static - replace DO_UFSDA with DO_JEDIVAR
 * scripts/exglobal_atmos_sfcanl.sh - new ex script for surface analysis
 * sorc/checkout.sh - check out head of NOAA-EMC/GSI develop
 * sorc/link_workflow.sh - remove version numbers from MinMon paths
 * ush/rocoto/setup_workflow.py - updates for JEDIVAR
    @RussTreadon-NOAA
    RussTreadon-NOAA committed Apr 26, 2022
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Commits on Jun 9, 2022

  1. Update gsi build and link

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 9, 2022
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Commits on Jun 17, 2022

  1. Extend prototype JEDI-GDAS cycling to include JEDI hybvar and lgetkf

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 17, 2022
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  2. Merge branch develop at b41a36a into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 17, 2022
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  3. Add jobs and configs for JEDI_VAR and JEDI_ENS

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 17, 2022
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Commits on Jun 21, 2022

  1. Remove jobs/JGDAS_GLOBAL_ATMOS_ENSANAL (erroneously committed)

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 21, 2022
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  2. Add external jobs/JGDAS_GLOBAL_ATMOS_ENSANAL to .gitignore

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 21, 2022
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Commits on Jun 24, 2022

  1. Update sfcanl in env and setup_workflow.py

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 24, 2022
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Commits on Jun 29, 2022

  1. Incoporate review feedback for JEDI, postanl, and sfcanl

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 29, 2022
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  2. Remove DOGCYCLE from sfcanl script, correct typo in config.postanl

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 29, 2022
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  3. Merge branch 'develop' at f0f1025 into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jun 29, 2022
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Commits on Jul 1, 2022

  1. Refactor JEDI-VAR and JEDI-ENS jobs, remove postanl (#871) 

     - refactor JEDI-VAR and JEDI-ENS rocoto jobs to be consistent with other jobs
 - remove postanl job, config, and xml generation
 - split JEDI-VAR and JEDI-ENS resources into job specific sections
 - link function specific JEDI-VAR and JEDI-ENS j-jobs
    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 1, 2022
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  2. add JEDI-VAR and JEDI-ENS j-jobs to .gitignore

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 1, 2022
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Commits on Jul 5, 2022

  1. Merge branch 'develop' into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 5, 2022
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Commits on Jul 6, 2022

  1. Merge branch 'develop' into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 6, 2022
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Commits on Jul 18, 2022

  1. Merge branch 'develop' at 13385d9 into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 18, 2022
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  2. Merge branch 'develop' at e8361cc into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 18, 2022
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  3. Merge branch 'develop' at 5a58fa8 into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 18, 2022
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  4. Merge branch 'develop' into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 18, 2022
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Commits on Jul 20, 2022

  1. Merge branch 'develop' into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 20, 2022
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Commits on Jul 21, 2022

  1. Update xml generation to include JEDI_VAR and JEDI_ENS

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 21, 2022
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Commits on Jul 22, 2022

  1. Merge branch 'develop' into feature/ufsda-gdasapp

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  2. Update JEDI_VAR dependencies for sfcanl and analcalc

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  3. Update JEDI_ENS dependencies for ecen and esfc

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  4. Update workflow python scripts as recommended by reviewer

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  5. Update atmanalrun dependency as suggested by reviewer

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  6. Update initialization of gdas_tasks as suggested by reviewers

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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  7. Add flag for JEDI_ENS to config.base.nco.static

    @RussTreadon-NOAA
    RussTreadon-NOAA committed Jul 22, 2022
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