Ens fix 1210 #458
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,123 @@ | ||
| #!/bin/bash | ||
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| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # This script runs the save_input to save DA analysis files to nwges | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
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||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Source the variable definitions file and the bash utility functions. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| . ${GLOBAL_VAR_DEFNS_FP} | ||
| . $USHDIR/source_util_funcs.sh | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Save current shell options (in a global array). Then set new options | ||
| # for this script/function. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| { save_shell_opts; set -u -x; } > /dev/null 2>&1 | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Get the full path to the file in which this script/function is located | ||
| # (scrfunc_fp), the name of that file (scrfunc_fn), and the directory in | ||
| # which the file is located (scrfunc_dir). | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| scrfunc_fp=$( readlink -f "${BASH_SOURCE[0]}" ) | ||
| scrfunc_fn=$( basename "${scrfunc_fp}" ) | ||
| scrfunc_dir=$( dirname "${scrfunc_fp}" ) | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Print message indicating entry into script. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| print_info_msg " | ||
| ======================================================================== | ||
| Entering script: \"${scrfunc_fn}\" | ||
| In directory: \"${scrfunc_dir}\" | ||
| This is the J-job script for the task that runs the post-processor (UPP) | ||
| on the output files corresponding to a specified forecast hour. | ||
| ========================================================================" | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Set the run directory. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # CYCLE_TYPE is to indicate which type of cycle this job for: | ||
| # spinup: this job is for spin-up cycles | ||
| # others(prod): this job is for product cycle | ||
| # | ||
| # NWGES_DIR is the directory in which the model IC file (DA analysis) will be saved | ||
| # | ||
| CYCLE_TYPE=${CYCLE_TYPE:-prod} | ||
| CYCLE_SUBTYPE=${CYCLE_SUBTYPE:-empty} | ||
| if [ ${CYCLE_TYPE} == "spinup" ]; then | ||
| run_dir="${CYCLE_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam_spinup" | ||
| nwges_dir="${NWGES_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam_spinup" | ||
| if [ ${CYCLE_SUBTYPE} == "ensinit" ]; then | ||
| run_dir="${CYCLE_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam_ensinit" | ||
| nwges_dir="${NWGES_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam_ensinit" | ||
| fi | ||
| else | ||
| run_dir="${CYCLE_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam" | ||
| nwges_dir="${NWGES_DIR}${SLASH_ENSMEM_SUBDIR}/fcst_fv3lam" | ||
| fi | ||
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| if [ "${RUN_ENVIR}" = "nco" ]; then | ||
| mkdir_vrfy -p "${nwges_dir}/DA_OUTPUT" | ||
| fi | ||
|
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||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Call the ex-script for this J-job and pass to it the necessary varia- | ||
| # bles. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| $SCRIPTSDIR/exregional_save_input.sh \ | ||
| cdate="${CDATE}" \ | ||
| run_dir="${run_dir}" \ | ||
| nwges_dir="${nwges_dir}" \ | ||
| cycle_type="${CYCLE_TYPE}" \ | ||
| cycle_subtype="${CYCLE_SUBTYPE}" || \ | ||
| print_err_msg_exit "\ | ||
| Call to ex-script corresponding to J-job \"${scrfunc_fn}\" failed." | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Print exit message. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| print_info_msg " | ||
| ======================================================================== | ||
| Exiting script: \"${scrfunc_fn}\" | ||
| In directory: \"${scrfunc_dir}\" | ||
| ========================================================================" | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Restore the shell options saved at the beginning of this script/func- | ||
| # tion. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| { restore_shell_opts; } > /dev/null 2>&1 | ||
|
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||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,152 @@ | ||
| #!/bin/bash | ||
|
|
||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Source the variable definitions file and the bash utility functions. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| . ${GLOBAL_VAR_DEFNS_FP} | ||
| . $USHDIR/source_util_funcs.sh | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Save current shell options (in a global array). Then set new options | ||
| # for this script/function. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| { save_shell_opts; set -u +x; } > /dev/null 2>&1 | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Get the full path to the file in which this script/function is located | ||
| # (scrfunc_fp), the name of that file (scrfunc_fn), and the directory in | ||
| # which the file is located (scrfunc_dir). | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| scrfunc_fp=$( readlink -f "${BASH_SOURCE[0]}" ) | ||
| scrfunc_fn=$( basename "${scrfunc_fp}" ) | ||
| scrfunc_dir=$( dirname "${scrfunc_fp}" ) | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Print message indicating entry into script. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| print_info_msg " | ||
| ======================================================================== | ||
| Entering script: \"${scrfunc_fn}\" | ||
| In directory: \"${scrfunc_dir}\" | ||
| This is the ex-script for the task that runs the post-processor (UPP) on | ||
| the output files corresponding to a specified forecast hour. | ||
| ========================================================================" | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Specify the set of valid argument names for this script/function. | ||
| # Then process the arguments provided to this script/function (which | ||
| # should consist of a set of name-value pairs of the form arg1="value1", | ||
| # etc). | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| valid_args=( \ | ||
| "cdate" \ | ||
| "run_dir" \ | ||
| "nwges_dir" \ | ||
| "cycle_type" \ | ||
| "cycle_subtype" \ | ||
| ) | ||
| process_args valid_args "$@" | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # For debugging purposes, print out values of arguments passed to this | ||
| # script. Note that these will be printed out only if VERBOSE is set to | ||
| # TRUE. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| print_input_args valid_args | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Get the cycle date and hour (in formats of yyyymmdd and hh, respectively) | ||
| # from cdate. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| yyyymmdd=${cdate:0:8} | ||
| hh=${cdate:8:2} | ||
| cyc=$hh | ||
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| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Let's save the DA analysis files if needed before run fcst. | ||
| # This will copy the data assimilation analysis files from $run_dir/INPUT/ | ||
| # to ${nwges_dir}/DA_OUTPUT/, | ||
| # this is to prepare for ensemble free forecast after the ensemble data assimilation | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| filelist="fv_core.res.nc coupler.res" | ||
| filelistn="fv_core.res.tile1.nc fv_srf_wnd.res.tile1.nc fv_tracer.res.tile1.nc phy_data.nc sfc_data.nc" | ||
| filelistcold="gfs_data.tile7.halo0.nc sfc_data.tile7.halo0.nc" | ||
| n_iolayouty=$(($IO_LAYOUT_Y-1)) | ||
| list_iolayout=$(seq 0 $n_iolayouty) | ||
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| if [ ! -r ${nwges_dir}/DA_OUTPUT/gfs_ctrl.nc ]; then | ||
| cp_vrfy $run_dir/INPUT/gfs_ctrl.nc ${nwges_dir}/DA_OUTPUT/gfs_ctrl.nc | ||
| if [ -r ${run_dir}/INPUT/coupler.res ]; then # warm start | ||
| if [ "${IO_LAYOUT_Y}" == "1" ]; then | ||
| for file in ${filelistn}; do | ||
| cp_vrfy $run_dir/INPUT/${file} ${nwges_dir}/DA_OUTPUT/${file} | ||
| done | ||
| else | ||
| for file in ${filelistn}; do | ||
| for ii in ${list_iolayout} | ||
| do | ||
| iii=$(printf %4.4i $ii) | ||
| cp_vrfy $run_dir/INPUT/${file}.${iii} ${nwges_dir}/DA_OUTPUT/${file}.${iii} | ||
| done | ||
| done | ||
| fi | ||
| for file in ${filelist}; do | ||
| cp_vrfy $run_dir/INPUT/${file} ${nwges_dir}/DA_OUTPUT/${file} | ||
| done | ||
| else # cold start | ||
| for file in ${filelistcold}; do | ||
| cp_vrfy $run_dir/INPUT/${file} ${nwges_dir}/DA_OUTPUT/${file} | ||
| done | ||
| fi | ||
| fi | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Print message indicating successful completion of script. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| print_info_msg " | ||
| ======================================================================== | ||
| save DA analysis completed successfully. | ||
| Exiting script: \"${scrfunc_fn}\" | ||
| In directory: \"${scrfunc_dir}\" | ||
| ========================================================================" | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| # Restore the shell options saved at the beginning of this script/func- | ||
| # tion. | ||
| # | ||
| #----------------------------------------------------------------------- | ||
| # | ||
| { restore_shell_opts; } > /dev/null 2>&1 | ||
|
|
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Do we need so many checks? This only save INPUT from prod cycle.
It does need to generate a nwges directory that has different name from prod.