[pygenomeworks] Fix counts of incorrect starts and ends in evaluate_paf #562
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
in evaluate_paf. The `evaluate_paf` script now reports mismatched starts/ends only from the best match, rather than adding on every iteration.
…nd searches where the query/target keys are reversed.
tijyojwad
suggested changes
Sep 21, 2020
tijyojwad
approved these changes
Sep 22, 2020
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Address an issues raised by #560 where the numbers of incorrect starts/ends in a PAF file were counted multiple times.