Issue with SILAC analysis on DDA PASEF data

[hcahaya]

I encountered the following error:
2024-02-26 20:29:58 [INFO] - Updating Philosopher's tables...
2024-02-26 20:29:58 [INFO] - Performing label quant...
2024-02-26 20:29:58 [INFO] - Re-quantifying
java.lang.ArrayIndexOutOfBoundsException: Index -1 out of bounds for length 14
at r.a(Unknown Source)
at r.(Unknown Source)
at ionquant.IonQuant.main(Unknown Source)
2024-02-26 20:30:05 [INFO] - Combining experiments and estimating protein intensity...
2024-02-26 20:30:05 [ERROR] - Index -1 out of bounds for length 14
Process 'IonQuant' finished, exit code: 1
Process returned non-zero exit code, stopping

Here's the log file
log_2024-02-26_20-34-55.txt

[fcyu]

It is a known issue: #1387

Could you send an email to yufe AY umich.edu to get a fixed version?

Thanks,

Fengchao

[hcahaya]

Great. Thank you!

[hcahaya]

Hi Fengchao, I sent an email at yufe at umich.edu yesterday. I still have not heard anything.

[fcyu]

I received your email 1 hour ago, and just replied it.

Best,

Fengchao