compute_RTOP

Use:

In python script by importing:

from compute_RTOP.RTOP import compute_RTOP

OR in command line:

python compute_RTOP.py arg1_dwi arg2_mask arg3_bvals arg4_bvecs

Requires 4 arguments:

• path to the dMRI image
• path to the mask on which to compute RTOP (must be in the same space as the dMRI image)
• path to the b-values used during the acquisition
• path to the b-vectors used during the acquisition