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  • Lisbon

Organizations

@CoBiG2 @B-UMMI

Pinned repositories

  1. assemblerflow/flowcraft

    A Nextflow pipeline assembler for genomics 🐳📦

    Python 59 7

  2. TriFusion

    Streamlining phylogenomic data gathering, processing and visualization

    Python 33 12

  3. innuca-nf

    A nextflow implementation of INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

    Python 2

  4. assemblerflow/flowcraft-webapp

    FlowCraft companion web application

    JavaScript 1

  5. SNPair_LD

    Calculates pairwise SNP linkage disequilibirum from a VCF file

    R 2

  6. vcf2PCA

    Principal component analysis of SNP data with interactive plot

    R 2

2,444 contributions in the last year

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Activity overview
Contributed to assemblerflow/flowcraft, ODiogoSilva/innuca-nf, ODiogoSilva/report-nf and 5 other repositories

Contribution activity
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September 2018

Created a pull request in assemblerflow/flowcraft that received 1 comment

Reports

This PR adds the backend functionality that allows the JSON report data generated by flowcraft pipelines to be provided to the web application for …

+3,173 −274 • 1 comment

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