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toucan

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TOols and Utilities for the can-do toucan

Documentation available here.

Installation

You should have Python 3.6+.

Install the 'package' by cloning the repo and running setup.py. This is likely to be constantly updated, so I personally go python setup.py develop.

$ git clone git@github.com:OMaraLab/toucan.git
$ cd toucan
$ python setup.py develop

Some of the utilities use information such as your Raijin account details, or your GitHub username. To set this up, use the make_user_profile script to write a $HOME/.usr_profile that provides these details.

I usually just clone this repository and add toucan/toucan/utilities to my path. You can do this by adding the line below to your ~/.bashrc:

export PATH=/path/to/dir/toucan/toucan/utilties:$PATH

You may also have to add execute permissions to the files.

$ chmod a+x *

Copyright

Copyright (c) 2019, OMaraLab

Acknowledgements

Project based on the Computational Molecular Science Python Cookiecutter

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