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Changing transpor direction in the expression is not applied in the simulation #2761

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PavelBal opened this issue Sep 13, 2023 · 2 comments · Fixed by #2818
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Changing transpor direction in the expression is not applied in the simulation #2761

PavelBal opened this issue Sep 13, 2023 · 2 comments · Fixed by #2818
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hotfix To be implemented in hotfix release notes To be added in release notes type: bug
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@PavelBal
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  1. Add a transporter protein with direction "Efflux"
  2. Add a transport process using the new transporter protein to a molecule
  3. Create a simulation and send to MoBi:

image

  1. In the Expression Profile, change the direction of the transporter protein to "Influx". Simulation becomes "Red" and the comparison with building block correctly shows the difference in direction:
    image

  2. Right click on individual BB in the simulation and select "Update from BB"

  3. Send the updated simulation to MoBi -> Direction of the transport is still "Efflux":

image

@PavelBal
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Version 11.2

@Yuri05 Yuri05 added this to the Version 12 milestone Sep 13, 2023
@msevestre msevestre self-assigned this Oct 17, 2023
@msevestre
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It's because this is not seen as a structural change of the BB and the update will only be seen as a parameter update (which is quick update)

msevestre added a commit that referenced this issue Oct 23, 2023
msevestre added a commit that referenced this issue Oct 24, 2023
* Fixes #2761 change transport direction

* Update after code review
@msevestre msevestre added the release notes To be added in release notes label Oct 27, 2023
@rwmcintosh rwmcintosh added the hotfix To be implemented in hotfix label Feb 28, 2024
rwmcintosh added a commit that referenced this issue Feb 28, 2024
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Labels
hotfix To be implemented in hotfix release notes To be added in release notes type: bug
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