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views.py
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views.py
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import logging
from celery_once import AlreadyQueued
from django.conf import settings
from django.core.exceptions import ValidationError
from django.db import IntegrityError
from django.db.models import Q
from django.http import Http404
from django.shortcuts import get_object_or_404
from drf_yasg.utils import swagger_auto_schema
from pydash import get
from rest_framework import status
from rest_framework.generics import (
RetrieveAPIView, ListAPIView, UpdateAPIView, CreateAPIView)
from rest_framework.response import Response
from core.bundles.serializers import BundleSerializer
from core.client_configs.views import ResourceClientConfigsView
from core.common.constants import HEAD, RELEASED_PARAM, PROCESSING_PARAM, ACCESS_TYPE_NONE
from core.common.exceptions import Http405, Http400
from core.common.mixins import ListWithHeadersMixin, ConceptDictionaryCreateMixin, ConceptDictionaryUpdateMixin, \
ConceptContainerExportMixin, ConceptContainerProcessingMixin
from core.common.permissions import CanViewConceptDictionary, CanEditConceptDictionary, HasAccessToVersionedObject, \
CanViewConceptDictionaryVersion
from core.common.serializers import TaskSerializer
from core.common.swagger_parameters import q_param, limit_param, sort_desc_param, sort_asc_param, \
page_param, verbose_param, include_retired_param, updated_since_param, include_facets_header, compress_header
from core.common.tasks import export_source, index_source_concepts, index_source_mappings, delete_source
from core.common.utils import parse_boolean_query_param, compact_dict_by_values, to_parent_uri
from core.common.views import BaseAPIView, BaseLogoView, ConceptContainerExtraRetrieveUpdateDestroyView, TaskMixin
from core.sources.constants import DELETE_FAILURE, DELETE_SUCCESS, VERSION_ALREADY_EXISTS
from core.sources.documents import SourceDocument
from core.sources.mixins import SummaryMixin
from core.sources.models import Source
from core.sources.search import SourceFacetedSearch
from core.sources.serializers import (
SourceDetailSerializer, SourceListSerializer, SourceCreateSerializer, SourceVersionDetailSerializer,
SourceVersionListSerializer, SourceVersionExportSerializer, SourceSummaryDetailSerializer,
SourceVersionSummaryDetailSerializer, SourceMinimalSerializer, SourceSummaryVerboseSerializer,
SourceVersionSummaryVerboseSerializer, SourceSummaryFieldDistributionSerializer,
SourceVersionSummaryFieldDistributionSerializer, SourceVersionMinimalSerializer)
from core.toggles.models import Toggle
logger = logging.getLogger('oclapi')
class SourceBaseView(BaseAPIView):
lookup_field = 'source'
pk_field = 'mnemonic'
model = Source
permission_classes = (CanViewConceptDictionary,)
queryset = Source.objects.filter(is_active=True)
def verify_scope(self):
has_owner_scope = self.has_owner_scope()
has_no_kwargs = self.has_no_kwargs()
if not self.user_is_self:
if has_no_kwargs:
if self.request.method not in ['GET', 'HEAD']:
raise Http404()
elif not has_owner_scope:
raise Http404()
def get_detail_serializer(self, obj):
return SourceDetailSerializer(obj)
def get_filter_params(self, default_version_to_head=True):
query_params = self.request.query_params.dict()
version = query_params.get('version', None) or self.kwargs.get('version', None)
if not version and default_version_to_head:
version = HEAD
kwargs = self.kwargs.copy()
if self.user_is_self and self.request.user.is_authenticated:
kwargs['user'] = self.request.user.username
return {**query_params.copy(), **kwargs, 'version': version}
def get_queryset(self):
queryset = Source.get_base_queryset(
compact_dict_by_values(self.get_filter_params())
).select_related(
'user', 'organization'
)
if self.is_verbose():
queryset = queryset.select_related('created_by', 'updated_by')
return queryset
class SourceVersionBaseView(SourceBaseView):
def get_filter_params(self, default_version_to_head=False):
return super().get_filter_params(default_version_to_head)
class SourceListView(SourceBaseView, ConceptDictionaryCreateMixin, ListWithHeadersMixin):
serializer_class = SourceListSerializer
is_searchable = True
es_fields = Source.es_fields
document_model = SourceDocument
facet_class = SourceFacetedSearch
default_filters = {'version': HEAD}
def apply_filters(self, queryset):
return queryset
def get_queryset(self):
queryset = super().get_queryset()
queryset = self.apply_filters(queryset)
user = self.request.user
if get(user, 'is_staff'):
return queryset
if get(user, 'is_anonymous'):
return queryset.exclude(public_access=ACCESS_TYPE_NONE)
public_queryset = queryset.exclude(public_access=ACCESS_TYPE_NONE)
private_queryset = queryset.filter(public_access=ACCESS_TYPE_NONE)
private_queryset = private_queryset.filter(Q(user_id=user.id) | Q(organization__members__id=user.id))
return public_queryset.union(private_queryset)
def get_serializer_class(self):
if self.is_brief():
return SourceMinimalSerializer
if self.request.method == 'GET' and self.is_verbose():
return SourceDetailSerializer
if self.request.method == 'POST':
return SourceCreateSerializer
return SourceListSerializer
@swagger_auto_schema(
manual_parameters=[
q_param, limit_param, sort_desc_param, sort_asc_param, page_param, verbose_param,
include_retired_param, updated_since_param, include_facets_header, compress_header
]
)
def get(self, request, *args, **kwargs):
return self.list(request, *args, **kwargs)
def get_csv_rows(self, queryset=None): # pragma: no cover
if not queryset:
queryset = self.get_queryset()
values = queryset.values('mnemonic', 'name', 'full_name', 'source_type', 'description', 'default_locale',
'supported_locales', 'website', 'external_id', 'updated_at', 'updated_by', 'uri')
for value in values:
value['Owner'] = Source.objects.get(uri=value['uri']).parent.mnemonic
value['Source ID'] = value.pop('mnemonic')
value['Source Name'] = value.pop('name')
value['Source Full Name'] = value.pop('full_name')
value['Source Type'] = value.pop('source_type')
value['Description'] = value.pop('description')
value['Default Locale'] = value.pop('default_locale')
value['Supported Locales'] = ",".join(value.pop('supported_locales'))
value['Website'] = value.pop('website')
value['External ID'] = value.pop('external_id')
value['Last Updated'] = value.pop('updated_at')
value['Updated By'] = value.pop('updated_by')
value['URI'] = value.pop('uri')
values.field_names.extend([
'Owner', 'Source ID', 'Source Name', 'Source Full Name', 'Source Type', 'Description', 'Default Locale',
'Supported Locales', 'Website', 'External ID', 'Last Updated', 'Updated By', 'URI'
])
del values.field_names[0:12]
return values
class SourceLogoView(SourceBaseView, BaseLogoView):
serializer_class = SourceDetailSerializer
def get_permissions(self):
if self.request.method in ['GET', 'HEAD']:
return [CanViewConceptDictionary()]
return [CanEditConceptDictionary()]
class SourceRetrieveUpdateDestroyView(SourceBaseView, ConceptDictionaryUpdateMixin, RetrieveAPIView, TaskMixin):
serializer_class = SourceDetailSerializer
def get_object(self, queryset=None):
instance = self.get_queryset().filter(is_active=True).order_by('-created_at').first()
if not instance:
raise Http404()
self.check_object_permissions(self.request, instance)
if not get(settings, 'TEST_MODE', False):
if instance.should_set_active_concepts:
instance.update_concepts_count()
if instance.should_set_active_mappings:
instance.update_mappings_count()
for version in instance.versions.exclude(id=instance.id):
if version.should_set_active_mappings:
version.update_concepts_count()
if version.should_set_active_mappings:
version.update_mappings_count()
if Toggle.get('CHECKSUMS_TOGGLE'):
instance.get_checksums()
for version in instance.versions:
version.get_checksums()
return instance
def get_permissions(self):
if self.request.method in ['GET', 'HEAD']:
return [CanViewConceptDictionary()]
return [CanEditConceptDictionary()]
def delete(self, request, *args, **kwargs): # pylint: disable=unused-argument
source = self.get_object()
result = self.perform_task(delete_source, (source.id, ))
if isinstance(result, Response):
return result
if result is True:
return Response({'detail': DELETE_SUCCESS}, status=status.HTTP_204_NO_CONTENT)
return Response({'detail': get(result, 'messages', [DELETE_FAILURE])}, status=status.HTTP_400_BAD_REQUEST)
class SourceVersionListView(SourceVersionBaseView, CreateAPIView, ListWithHeadersMixin):
released_filter = None
processing_filter = None
default_qs_sort_attr = '-created_at'
def get_serializer_class(self):
if self.request.method in ['GET', 'HEAD'] and self.is_verbose():
return SourceVersionDetailSerializer
if self.request.method == 'POST':
return SourceCreateSerializer
if self.is_brief():
return SourceVersionMinimalSerializer
return SourceVersionListSerializer
def get(self, request, *args, **kwargs):
self.released_filter = parse_boolean_query_param(request, RELEASED_PARAM, self.released_filter)
self.processing_filter = parse_boolean_query_param(request, PROCESSING_PARAM, self.processing_filter)
return self.list(request, *args, **kwargs)
def create(self, request, *args, **kwargs):
head_object = self.get_queryset().first()
version = request.data.pop('id', None)
payload = {
"mnemonic": head_object.mnemonic, "id": head_object.mnemonic, "name": head_object.name, **request.data,
"organization_id": head_object.organization_id, "user_id": head_object.user_id,
'version': version
}
serializer = self.get_serializer(data=payload)
if serializer.is_valid():
try:
instance = serializer.create_version(payload)
if serializer.is_valid():
serializer = SourceDetailSerializer(instance, context={'request': request})
return Response(serializer.data, status=status.HTTP_201_CREATED)
except IntegrityError as ex:
return Response(
{
'error': str(ex),
'detail': VERSION_ALREADY_EXISTS.format(version)
},
status=status.HTTP_409_CONFLICT
)
return Response(serializer.errors, status=status.HTTP_400_BAD_REQUEST)
def get_queryset(self):
queryset = super().get_queryset()
if self.released_filter is not None:
queryset = queryset.filter(released=self.released_filter)
return queryset.order_by('-created_at')
class SourceLatestVersionRetrieveUpdateView(SourceVersionBaseView, RetrieveAPIView, UpdateAPIView):
serializer_class = SourceVersionDetailSerializer
permission_classes = (CanViewConceptDictionaryVersion,)
def get_object(self, queryset=None):
obj = self.get_queryset().first()
if not obj:
raise Http404
self.check_object_permissions(self.request, obj)
return obj
def get_queryset(self):
queryset = super().get_queryset().filter(released=True)
return queryset.order_by('-created_at')
def update(self, request, *args, **kwargs):
self.object = self.get_object()
head = self.object.head
if not head:
return Response(status=status.HTTP_405_METHOD_NOT_ALLOWED)
serializer = self.get_serializer(self.object, data=request.data, partial=True)
if serializer.is_valid():
self.object = serializer.save(force_update=True)
if serializer.is_valid():
serializer = SourceVersionDetailSerializer(self.object, context={'request': request})
return Response(serializer.data, status=status.HTTP_200_OK)
return Response(serializer.errors, status=status.HTTP_400_BAD_REQUEST)
class SourceConceptsIndexView(SourceBaseView):
serializer_class = TaskSerializer
def get_queryset(self):
return Source.get_base_queryset(compact_dict_by_values(self.get_filter_params()))
def get_object(self, queryset=None):
instance = get_object_or_404(self.get_queryset())
self.check_object_permissions(self.request, instance)
return instance
def post(self, request, *args, **kwargs): # pylint: disable=unused-argument
source = self.get_object()
try:
result = index_source_concepts.delay(source.id)
except AlreadyQueued:
return Response({'detail': 'Already Queued'}, status=status.HTTP_409_CONFLICT)
return Response(
{
'state': result.state,
'username': self.request.user.username,
'task': result.task_id,
'queue': 'default'
},
status=status.HTTP_202_ACCEPTED
)
class SourceMappingsIndexView(SourceBaseView):
serializer_class = TaskSerializer
def get_queryset(self):
return Source.get_base_queryset(compact_dict_by_values(self.get_filter_params()))
def get_object(self, queryset=None):
instance = get_object_or_404(self.get_queryset())
self.check_object_permissions(self.request, instance)
return instance
def post(self, request, *args, **kwargs): # pylint: disable=unused-argument
source = self.get_object()
try:
result = index_source_mappings.delay(source.id)
except AlreadyQueued:
return Response({'detail': 'Already Queued'}, status=status.HTTP_409_CONFLICT)
return Response(
{
'state': result.state,
'username': self.request.user.username,
'task': result.task_id,
'queue': 'default'
},
status=status.HTTP_202_ACCEPTED
)
class SourceConceptsCloneView(SourceBaseView):
serializer_class = BundleSerializer
def post(self, request, **kwargs): # pylint: disable=unused-argument, too-many-locals
"""
body:
{
“expressions”: [“/orgs/CIEL/sources/CIEL/concepts/123/”], (cloneFrom)
“parameters”: { ….same as cascade… }
}
"""
expressions = request.data.get('expressions')
parameters = request.data.get('parameters') or {}
if not expressions:
raise Http400()
instance = self.get_object()
results = {}
parent_resources = {}
is_verbose = self.is_verbose()
for expression in expressions:
from core.concepts.models import Concept
result = {}
concept_to_clone = Concept.objects.filter(uri=expression).first()
if concept_to_clone:
parent_uri = to_parent_uri(expression)
if parent_uri not in parent_resources:
parent_resources[parent_uri] = Source.objects.filter(uri=parent_uri).first()
parent_resource = parent_resources[parent_uri]
from core.bundles.models import Bundle
bundle = Bundle.clone(
concept_to_clone, parent_resource, instance, request.user,
self.request.get_full_path(), is_verbose, **parameters
)
result['status'] = status.HTTP_200_OK
result['bundle'] = BundleSerializer(bundle, context={'request': request}).data
else:
result['status'] = status.HTTP_404_NOT_FOUND
result['errors'] = [f'Concept to clone with expression {expression} not found.']
results[expression] = result
return Response(results, status.HTTP_200_OK)
class SourceVersionRetrieveUpdateDestroyView(SourceVersionBaseView, RetrieveAPIView, UpdateAPIView):
serializer_class = SourceVersionDetailSerializer
def get_permissions(self):
if self.request.method == 'GET':
return [CanViewConceptDictionaryVersion()]
return [HasAccessToVersionedObject()]
def get_object(self, queryset=None):
instance = get_object_or_404(self.get_queryset())
self.check_object_permissions(self.request, instance)
if not get(settings, 'TEST_MODE', False):
if instance.should_set_active_concepts:
instance.update_concepts_count()
if instance.should_set_active_mappings:
instance.update_mappings_count()
return instance
def update(self, request, *args, **kwargs):
self.object = self.get_object()
head = self.object.head
if not head:
return Response(status=status.HTTP_405_METHOD_NOT_ALLOWED)
external_id = get(request.data, 'version_external_id')
if external_id:
request.data['external_id'] = external_id
serializer = self.get_serializer(self.object, data=request.data, partial=True)
if serializer.is_valid():
self.object = serializer.save(force_update=True)
if serializer.is_valid():
self.object.get_checksums(recalculate=False)
return Response(serializer.data, status=status.HTTP_200_OK)
return Response(serializer.errors, status=status.HTTP_400_BAD_REQUEST)
def delete(self, _, **kwargs): # pylint: disable=unused-argument
instance = self.get_object()
try:
instance.delete()
except ValidationError as ex:
return Response(ex.message_dict, status=status.HTTP_400_BAD_REQUEST)
return Response(status=status.HTTP_204_NO_CONTENT)
class SourceExtrasBaseView(SourceBaseView):
def get_object(self, queryset=None):
return get_object_or_404(self.get_queryset(), version=HEAD)
class SourceExtrasView(SourceExtrasBaseView, ListAPIView):
serializer_class = SourceDetailSerializer
def list(self, request, *args, **kwargs):
return Response(get(self.get_object(), 'extras', {}))
class SourceVersionExtrasView(SourceBaseView, ListAPIView):
serializer_class = SourceDetailSerializer
def list(self, request, *args, **kwargs):
instance = get_object_or_404(self.get_queryset(), version=self.kwargs['version'])
return Response(get(instance, 'extras', {}))
class SourceExtraRetrieveUpdateDestroyView(SourceExtrasBaseView, ConceptContainerExtraRetrieveUpdateDestroyView):
serializer_class = SourceDetailSerializer
class SourceVersionProcessingView(SourceBaseView, ConceptContainerProcessingMixin):
serializer_class = SourceVersionDetailSerializer
resource = 'source'
class SourceVersionExportView(ConceptContainerExportMixin, SourceVersionBaseView):
entity = 'Source'
permission_classes = (CanViewConceptDictionary,)
serializer_class = SourceVersionExportSerializer
def handle_export_version(self):
version = self.get_object()
try:
export_source.delay(version.id)
return status.HTTP_202_ACCEPTED
except AlreadyQueued:
return status.HTTP_409_CONFLICT
class SourceHierarchyView(SourceBaseView, RetrieveAPIView):
serializer_class = SourceSummaryDetailSerializer
permission_classes = (CanViewConceptDictionary,)
def get_object(self, queryset=None):
instance = get_object_or_404(self.get_queryset())
self.check_object_permissions(self.request, instance)
return instance
def retrieve(self, request, *args, **kwargs):
instance = self.get_object()
params = self.request.query_params.dict()
limit = 100
offset = 0
if 'limit' in params:
limit = int(params.get('limit'))
if 'offset' in params:
offset = int(params.get('offset'))
return Response(instance.hierarchy(offset=offset, limit=limit))
class SourceSummaryView(SummaryMixin, SourceBaseView, RetrieveAPIView):
serializer_class = SourceSummaryDetailSerializer
permission_classes = (CanViewConceptDictionary,)
def get_serializer_class(self):
if self.is_verbose():
if self.request.query_params.get('distribution'):
return SourceSummaryFieldDistributionSerializer
return SourceSummaryVerboseSerializer
return SourceSummaryDetailSerializer
class SourceVersionSummaryView(SummaryMixin, SourceVersionBaseView, RetrieveAPIView):
serializer_class = SourceVersionSummaryDetailSerializer
permission_classes = (CanViewConceptDictionary,)
def get_serializer_class(self):
if self.is_verbose():
if self.request.query_params.get('distribution'):
return SourceVersionSummaryFieldDistributionSerializer
return SourceVersionSummaryVerboseSerializer
return SourceVersionSummaryDetailSerializer
class SourceLatestVersionSummaryView(SourceVersionBaseView, RetrieveAPIView, UpdateAPIView):
serializer_class = SourceVersionSummaryDetailSerializer
permission_classes = (CanViewConceptDictionary,)
def get_serializer_class(self):
if self.is_verbose():
if self.request.query_params.get('distribution'):
return SourceVersionSummaryFieldDistributionSerializer
return SourceVersionSummaryVerboseSerializer
return SourceVersionSummaryDetailSerializer
def get_object(self, queryset=None):
obj = self.get_queryset().first()
if not obj:
raise Http404
self.check_object_permissions(self.request, obj)
return obj
def get_queryset(self):
queryset = super().get_queryset().filter(released=True)
return queryset.order_by('-created_at')
class SourceClientConfigsView(SourceBaseView, ResourceClientConfigsView):
lookup_field = 'source'
model = Source
queryset = Source.objects.filter(is_active=True, version=HEAD)
permission_classes = (CanViewConceptDictionary, )
class SourceMappedSourcesListView(SourceListView):
is_searchable = False
def get_object(self, queryset=None):
instance = super().get_queryset().order_by('-created_at').first()
if not instance:
raise Http404()
self.check_object_permissions(self.request, instance)
return instance
def get_queryset(self):
instance = self.get_object()
return instance.get_mapped_sources()
def post(self, request, **kwargs):
raise Http405()