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Additional how-to guides #391

Merged
merged 58 commits into from Feb 9, 2021
Merged

Additional how-to guides #391

merged 58 commits into from Feb 9, 2021

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amageh
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@amageh amageh commented Dec 11, 2020

Changes

  • Guide on example models.

I think this is needed to show users which example models are available. I have a similar description at the end of our respy tutorial/showcase here. Some open things I am considering:

  • Adding the plots for the choice patterns.

  • Adding more info on model characteristics like initial conditions etc.

  • Guide on model specification.

So far, the respy documentation is missing a comprehensive guide on model specification. I based this guide on #353 and a similar draft by @rafaelsuchy on the replication of kw_94. Let me know whether you think the guide is too detailed/ not detailed enough or if you think we should maybe split some stuff up (i.e. I thought about adding an extra guide for core state space filters and negative choice sets and removing some of the info in this one, if I remember correctly, Max is planning to write a guide on covariates at some point).

It would maybe be nice to add a reference guide similar to this on model specification components. I considered maybe writing separate ones on how params and options are processed internally in respy (although my ability to write very advanced guides like this may be limited but I could try :-) ).

  • Update theses section.
  • Update release notes with all recent changes.
  • Update CI.

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@amageh amageh removed the request for review from mo2561057 December 11, 2020 08:30
@amageh amageh changed the title Additional how-to guides, adding state space filters to kw_97_basic Additional how-to guides Dec 11, 2020
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codecov bot commented Dec 11, 2020

Codecov Report

Merging #391 (16226d4) into main (29608d5) will increase coverage by 0.16%.
The diff coverage is 33.33%.

Impacted file tree graph

@@            Coverage Diff             @@
##             main     #391      +/-   ##
==========================================
+ Coverage   87.21%   87.38%   +0.16%     
==========================================
  Files          50       50              
  Lines        3646     3638       -8     
==========================================
- Hits         3180     3179       -1     
+ Misses        466      459       -7     
Flag Coverage Δ
end_to_end 73.41% <33.33%> (+0.13%) ⬆️
integration 63.88% <33.33%> (+0.03%) ⬆️
unit 72.26% <33.33%> (+1.74%) ⬆️

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Impacted Files Coverage Δ
respy/interpolate.py 95.12% <ø> (ø)
respy/pre_processing/model_checking.py 86.95% <0.00%> (ø)
respy/shared.py 83.47% <ø> (ø)
respy/simulate.py 95.70% <ø> (ø)
respy/solve.py 100.00% <ø> (ø)
respy/state_space.py 99.63% <ø> (ø)
respy/tests/test_randomness.py 100.00% <ø> (ø)
respy/tests/test_parallelization.py 100.00% <100.00%> (ø)
development/testing/__init__.py 32.35% <0.00%> (+3.78%) ⬆️

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@amageh amageh self-assigned this Dec 18, 2020
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Very good how to guide!

@amageh amageh merged commit 4344ea3 into main Feb 9, 2021
@amageh amageh deleted the add-filters-kw97 branch February 9, 2021 10:40
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4 participants