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The Data on the Original Hit

Mat Todd edited this page Jul 10, 2023 · 13 revisions

The original hit for OSM Series 3 is the following compound, 3-(4-aminothieno[3,2-d]pyrimidin-6-yl)benzenesulfonamide.

SMILES: NC1=C2C(C=C(C3=CC=CC(S(=O)(N)=O)=C3)S2)=NC=N1

InChl: InChI=1S/C12H10N4O2S2/c13-12-11-9(15-6-16-12)5-10(19-11)7-2-1-3-8(4-7)20(14,17)18/h1-6H,(H2,13,15,16)(H2,14,17,18)

InChl key: MQMXDJVOZKMSNT-UHFFFAOYSA-N

Codes/data for this compound elsewhere: CHEMBL581088, Pubchem CID 44528665, TCMDC-135294, MMV025100, OSM-S-106, ZINC000045301248

Calculated Compound Parent Properties:

ALogP Number of rotatable bonds Polar Surface Area Molecular Species HBA HBD Ro5 Violations
1.65 2 148.57 Neutral 5 2 0

Calculated physicochemical parameters using ChemAxon JChem software:

MW Polar Surface Area Freely Rotating Bonds HBD HBA Aromatic Rings Fsp3 cpKa cLogP cLogD (at pH 7.4) gLogD (at pH 7.4)
306.36 112.0 2 2 5 3 0 Basic: 3.8 Acidic: 10.1 1.3 1.3 1.4

Potency data :

GSK Pfal IC50 (GSK) Pfal IC50 (Dundee) Pfal (Avery) Single shot Inhibition
0.036 uM 0.088 uM 0.13 uM 0.036 uM 102 uM

OSM-S-106 was also evaluated in June/July 2018 at Dundee, giving values of ca. 100 nM.

Solubility

Solubility Range (ug/mL) Solubility Range (ug/mL)
pH 2 pH 6.5
50 - 100 12.5 - 25

Solubility June 2018

Solubility Range (ug/mL) Solubility Range (ug/mL)
pH 2 pH 6.5
50 - 100 6.3 - 12.5

Microsomal Stability

Species Degradation half life (min) CLint, in vitro(mL/min/mg protein) Microsomal-Predicted CL blood(mL/min/kg) Microsomal-Predicted Degradation Rate Classification
Human >247 <7 <5 <0.22 low
Mouse 37 47 60 0.5 Intermediate

Metabolic Stability May 2018

Species Degradation half life (min) CLint, in vitro (uL/min/mg protein) Predicted CLint, in vivo (mL/min/kg) Predicted CLblood (mL/min/kg) Predicted (EH) Degradation Rate Classification
Human >255 <7 <6 <5 <0.22 low
Mouse 23 76 196 74 0.62 Intermediate

Metabolic stability in rat cryopreserved hepatocytes

Degradation half life (min) In vitro CLint (uL/min/106) cells Predicted CLint(mL/min/kg) Predicted CLblood(mL/min/kg) Hepatocyte Predicted (EH) Degradation Rate Classification
>375 <1 <5 <5 <0.07 low

OSM-S-106 was sent to Pfizer for an in vitro biofunctionalisation experiment (April 2018) - data have not been posted anywhere yet.

Liver stage malaria activity

Species tested Assay plate conc (uM) Assay tested Parasite IC50 (uM) STD Parasite IC50 or 95% Confidence Intervals Max % parasite inhibition HepG2 IC50 (uM)
P.berghei 10 Luciferase Envision 2.348 0.7453 to 7.396 98.87% >10

hERG

In vitro potency (uM) hERG IC50 (uM) hERG pcIC50
0.11 >10 <5.00

Late Stage Gametocyte Assay

There is a limited amount of screening data for OSM-S-106 (CHEMBL581088) in ChEMBL, the only significant activity recorded was against Plasmodium falciparum.

ChEMBL_OSM_s_106

A May 2022 summary of the data on the original hit: