Merge remote-tracking branch 'origin/master'

PDAL · May 26, 2020 · 8e3008d · 8e3008d
2 parents ac1295c + 8379134
commit 8e3008d
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diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -26,9 +26,25 @@ mark_as_advanced(CMAKE_VERBOSE_MAKEFILE)
 # PDAL general settings
 #------------------------------------------------------------------------------
 
-set(PDAL_API_VERSION "10")
-set(PDAL_BUILD_VERSION "11")
+#
+# Must be changed if there is an ABI change.  This builds the SONAME
+# that's embedded in the library itself.
+#
+set(PDAL_SOLIB_MAJOR 11)
+#
+# Change if there's a new release with no ABI change
+#
+set(PDAL_SOLIB_MINOR 0)
+#
+# Build number.  Increment for builds within minor versions.  Probably
+# always 0 for PDAL
+#
+set(PDAL_SOLIB_BUILD 0)
+
 
+set(PDAL_API_VERSION ${PDAL_SOLIB_MAJOR})
+set(PDAL_BUILD_VERSION
+    "${PDAL_SOLIB_MAJOR}.${PDAL_SOLIB_MINOR}.${PDAL_SOLIB_BUILD}")
 set(CMAKE_CXX_STANDARD 11)
 set(CMAKE_CXX_STANDARD_REQUIRED ON)
 set(CMAKE_CXX_EXTENSIONS OFF)

diff --git a/HOWTORELEASE.txt b/HOWTORELEASE.txt
@@ -20,10 +20,10 @@ Release Process
     * CMake will break version down into PDAL_VERSION_MAJOR,
       PDAL_VERSION_MINOR, PDAL_VERSION_PATCH, and PDAL_VERSION_TWEAK.
 
-  - Update SO versioning
-    set(PDAL_API_VERSION "1")
-    set(PDAL_BUILD_VERSION "1.0.0")
-    * https://github.com/libspatialindex/libspatialindex/pull/44#issuecomment-57088783
+  - Update library version in CMakeLists.txt:
+    set(PDAL_SOLIB_MAJOR 11)
+    set(PDAL_SOLIB_MINOR 0)
+    set(PDAL_SOLIB_BUILD 0)
 
   - doc/download.rst point to new release
 

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diff --git a/doc/project/Radiant-Solutions-Logo-Color-1920.png b/doc/project/Radiant-Solutions-Logo-Color-1920.png
diff --git a/doc/project/alpine.rst b/doc/project/alpine.rst
diff --git a/doc/project/contributors.rst b/doc/project/contributors.rst
diff --git a/doc/project/conventions.rst b/doc/project/conventions.rst
diff --git a/doc/project/docker.rst b/doc/project/docker.rst
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diff --git a/doc/project/index.rst b/doc/project/index.rst
diff --git a/doc/project/integration.rst b/doc/project/integration.rst
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diff --git a/doc/python.rst b/doc/python.rst
diff --git a/doc/quickstart.rst b/doc/quickstart.rst
diff --git a/doc/references.rst b/doc/references.rst
diff --git a/doc/stages/filters.approximatecoplanar.rst b/doc/stages/filters.approximatecoplanar.rst
diff --git a/doc/stages/filters.assign.rst b/doc/stages/filters.assign.rst
diff --git a/doc/stages/filters.chipper.img1.png b/doc/stages/filters.chipper.img1.png
diff --git a/doc/stages/filters.chipper.img2.png b/doc/stages/filters.chipper.img2.png
diff --git a/doc/stages/filters.chipper.rst b/doc/stages/filters.chipper.rst
diff --git a/doc/stages/filters.cluster.rst b/doc/stages/filters.cluster.rst
@@ -42,3 +42,7 @@ tolerance
   Cluster tolerance - maximum Euclidean distance for a point to be added to the
   cluster. [Default: 1.0]
 
+is3d
+  By default, clusters are formed by considering neighbors in a 3D sphere, but
+  if ``is3d`` is set to false, it will instead consider neighbors in a 2D
+  cylinder (XY plane only). [Default: true]
diff --git a/doc/stages/filters.colorinterp.rst b/doc/stages/filters.colorinterp.rst
diff --git a/doc/stages/filters.colorization.img1.jpg b/doc/stages/filters.colorization.img1.jpg
diff --git a/doc/stages/filters.colorization.rst b/doc/stages/filters.colorization.rst
diff --git a/doc/stages/filters.covariancefeatures.rst b/doc/stages/filters.covariancefeatures.rst
@@ -46,6 +46,14 @@ stride
   stride of 1 retains each neighbor in order. A stride of two selects every
   other neighbor and so on. [Default: 1]
 
+min_k
+  Minimum number of neighbors in radius (radius search only). [Default: 3]
+
+radius
+  If radius specified greater than zero, neighbors will be obtained by radius
+  search rather than k nearest neighbors, subject to meeting the minimum number
+  of neighbors (``min_k``). [Default: 0.0]
+
 .. _dimensionality:
 
 Dimensionality feature set

diff --git a/doc/stages/filters.cpd.rst b/doc/stages/filters.cpd.rst
diff --git a/doc/stages/filters.crop.rst b/doc/stages/filters.crop.rst
diff --git a/doc/stages/filters.csf.rst b/doc/stages/filters.csf.rst
diff --git a/doc/stages/filters.dbscan.rst b/doc/stages/filters.dbscan.rst
diff --git a/doc/stages/filters.decimation.rst b/doc/stages/filters.decimation.rst
diff --git a/doc/stages/filters.delaunay.rst b/doc/stages/filters.delaunay.rst
diff --git a/doc/stages/filters.dem.rst b/doc/stages/filters.dem.rst
diff --git a/doc/stages/filters.divider.rst b/doc/stages/filters.divider.rst
diff --git a/doc/stages/filters.eigenvalues.rst b/doc/stages/filters.eigenvalues.rst
diff --git a/doc/stages/filters.elm.rst b/doc/stages/filters.elm.rst
diff --git a/doc/stages/filters.estimaterank.rst b/doc/stages/filters.estimaterank.rst
diff --git a/doc/stages/filters.farthestpointsampling.rst b/doc/stages/filters.farthestpointsampling.rst
diff --git a/doc/stages/filters.ferry.rst b/doc/stages/filters.ferry.rst
diff --git a/doc/stages/filters.greedyprojection.rst b/doc/stages/filters.greedyprojection.rst
diff --git a/doc/stages/filters.groupby.rst b/doc/stages/filters.groupby.rst
diff --git a/doc/stages/filters.hag.rst b/doc/stages/filters.hag.rst
diff --git a/doc/stages/filters.hag_delaunay.rst b/doc/stages/filters.hag_delaunay.rst
diff --git a/doc/stages/filters.hag_dem.rst b/doc/stages/filters.hag_dem.rst
diff --git a/doc/stages/filters.hag_nn.rst b/doc/stages/filters.hag_nn.rst
diff --git a/doc/stages/filters.head.rst b/doc/stages/filters.head.rst
diff --git a/doc/stages/filters.hexbin.img1.jpg b/doc/stages/filters.hexbin.img1.jpg
diff --git a/doc/stages/filters.hexbin.rst b/doc/stages/filters.hexbin.rst
diff --git a/doc/stages/filters.icp.rst b/doc/stages/filters.icp.rst
@@ -46,7 +46,7 @@ Examples
       "output.las"
   ]
 
-To get the transform matrix, you'll need to use the ``--metadata`` option
+To get the ``transform`` matrix, you'll need to use the ``--metadata`` option
 from the pipeline command:
 
 ::
@@ -63,14 +63,15 @@ The metadata output might start something like:
             "filters.icp":
             {
                 "centroid": "    583394  5.2831e+06   498.152",
+                "composed": "           1  2.60209e-18 -1.97906e-09       -0.374999  8.9407e-08            1  5.58794e-09      -0.614662 6.98492e -10 -5.58794e-09            1   0.033234           0            0            0            1",
                 "converged": true,
                 "fitness": 0.01953125097,
                 "transform": "           1  2.60209e-18 -1.97906e-09       -0.375  8.9407e-08            1  5.58794e-09      -0.5625 6.98492e -10 -5.58794e-09            1   0.00411987           0            0            0            1"
             }
 
 
-To apply this transformation to other points, the centroid and transform
-metadata items can by used with filters.transform in another pipeline.  First,
+To apply this transformation to other points, the ``centroid`` and ``transform``
+metadata items can by used with ``filters.transformation`` in another pipeline.  First,
 move the centroid of the points to (0,0,0), then apply the transform, then move
 the points back to the original location.  For the above metadata, the pipeline
 would be similar to:
@@ -100,6 +101,10 @@ would be similar to:
         }
     ]
 
+.. note::
+
+    The ``composed`` metadata matrix is a composition of the three transformation steps outlined above, and can be used in a single call to ``filters.transformation`` as opposed to the three separate calls.
+
 .. seealso::
 
     :ref:`filters.transformation` to apply a transform to other points.

diff --git a/doc/stages/filters.info.rst b/doc/stages/filters.info.rst
diff --git a/doc/stages/filters.iqr.rst b/doc/stages/filters.iqr.rst
diff --git a/doc/stages/filters.julia.rst b/doc/stages/filters.julia.rst
diff --git a/doc/stages/filters.locate.rst b/doc/stages/filters.locate.rst
diff --git a/doc/stages/filters.lof.rst b/doc/stages/filters.lof.rst
diff --git a/doc/stages/filters.mad.rst b/doc/stages/filters.mad.rst
diff --git a/doc/stages/filters.matlab.rst b/doc/stages/filters.matlab.rst
diff --git a/doc/stages/filters.merge.rst b/doc/stages/filters.merge.rst
diff --git a/doc/stages/filters.miniball.rst b/doc/stages/filters.miniball.rst
diff --git a/doc/stages/filters.mongo.rst b/doc/stages/filters.mongo.rst
diff --git a/doc/stages/filters.mortonorder.img1.png b/doc/stages/filters.mortonorder.img1.png
diff --git a/doc/stages/filters.mortonorder.rst b/doc/stages/filters.mortonorder.rst
diff --git a/doc/stages/filters.neighborclassifier.rst b/doc/stages/filters.neighborclassifier.rst
diff --git a/doc/stages/filters.nndistance.rst b/doc/stages/filters.nndistance.rst
diff --git a/doc/stages/filters.normal.rst b/doc/stages/filters.normal.rst
diff --git a/doc/stages/filters.outlier.rst b/doc/stages/filters.outlier.rst
diff --git a/doc/stages/filters.overlay.rst b/doc/stages/filters.overlay.rst
diff --git a/doc/stages/filters.planefit.rst b/doc/stages/filters.planefit.rst
diff --git a/doc/stages/filters.pmf.rst b/doc/stages/filters.pmf.rst
diff --git a/doc/stages/filters.poisson.rst b/doc/stages/filters.poisson.rst
diff --git a/doc/stages/filters.projpipeline.rst b/doc/stages/filters.projpipeline.rst
diff --git a/doc/stages/filters.python.rst b/doc/stages/filters.python.rst
diff --git a/doc/stages/filters.radialdensity.rst b/doc/stages/filters.radialdensity.rst
diff --git a/doc/stages/filters.randomize.rst b/doc/stages/filters.randomize.rst
diff --git a/doc/stages/filters.range.rst b/doc/stages/filters.range.rst
diff --git a/doc/stages/filters.reciprocity.rst b/doc/stages/filters.reciprocity.rst
diff --git a/doc/stages/filters.reprojection.rst b/doc/stages/filters.reprojection.rst
diff --git a/doc/stages/filters.returns.rst b/doc/stages/filters.returns.rst
diff --git a/doc/stages/filters.rst b/doc/stages/filters.rst
diff --git a/doc/stages/filters.sample.rst b/doc/stages/filters.sample.rst
diff --git a/doc/stages/filters.separatescanline.rst b/doc/stages/filters.separatescanline.rst
diff --git a/doc/stages/filters.shell.rst b/doc/stages/filters.shell.rst
diff --git a/doc/stages/filters.skewnessbalancing.rst b/doc/stages/filters.skewnessbalancing.rst
diff --git a/doc/stages/filters.smrf.rst b/doc/stages/filters.smrf.rst
diff --git a/doc/stages/filters.sort.rst b/doc/stages/filters.sort.rst
diff --git a/doc/stages/filters.splitter.rst b/doc/stages/filters.splitter.rst
diff --git a/doc/stages/filters.stats.rst b/doc/stages/filters.stats.rst
diff --git a/doc/stages/filters.streamcallback.rst b/doc/stages/filters.streamcallback.rst
diff --git a/doc/stages/filters.tail.rst b/doc/stages/filters.tail.rst
diff --git a/doc/stages/filters.transformation.rst b/doc/stages/filters.transformation.rst
diff --git a/doc/stages/filters.voxelcenternearestneighbor.rst b/doc/stages/filters.voxelcenternearestneighbor.rst
diff --git a/doc/stages/filters.voxelcentroidnearestneighbor.rst b/doc/stages/filters.voxelcentroidnearestneighbor.rst
diff --git a/doc/stages/filters.voxeldownsize.rst b/doc/stages/filters.voxeldownsize.rst
diff --git a/doc/stages/images/autzen-elevation.png b/doc/stages/images/autzen-elevation.png
diff --git a/doc/stages/images/autzen-hag-delaunay.png b/doc/stages/images/autzen-hag-delaunay.png
diff --git a/doc/stages/images/autzen-hag-dem.png b/doc/stages/images/autzen-hag-dem.png
diff --git a/doc/stages/images/autzen-hag-nn.png b/doc/stages/images/autzen-hag-nn.png
diff --git a/doc/stages/images/autzen-height.png b/doc/stages/images/autzen-height.png
diff --git a/doc/stages/reader_opts.rst b/doc/stages/reader_opts.rst
diff --git a/doc/stages/readers.bpf.rst b/doc/stages/readers.bpf.rst
diff --git a/doc/stages/readers.buffer.rst b/doc/stages/readers.buffer.rst
diff --git a/doc/stages/readers.e57.rst b/doc/stages/readers.e57.rst
diff --git a/doc/stages/readers.ept.rst b/doc/stages/readers.ept.rst
diff --git a/doc/stages/readers.faux.rst b/doc/stages/readers.faux.rst
diff --git a/doc/stages/readers.gdal.rst b/doc/stages/readers.gdal.rst
diff --git a/doc/stages/readers.geowave.rst b/doc/stages/readers.geowave.rst
diff --git a/doc/stages/readers.hdf.rst b/doc/stages/readers.hdf.rst
diff --git a/doc/stages/readers.i3s.rst b/doc/stages/readers.i3s.rst
diff --git a/doc/stages/readers.ilvis2.metadata.png b/doc/stages/readers.ilvis2.metadata.png
diff --git a/doc/stages/readers.ilvis2.rst b/doc/stages/readers.ilvis2.rst
diff --git a/doc/stages/readers.las.rst b/doc/stages/readers.las.rst
diff --git a/doc/stages/readers.matlab.rst b/doc/stages/readers.matlab.rst
diff --git a/doc/stages/readers.mbio.rst b/doc/stages/readers.mbio.rst
diff --git a/doc/stages/readers.memoryview.rst b/doc/stages/readers.memoryview.rst
diff --git a/doc/stages/readers.mrsid.rst b/doc/stages/readers.mrsid.rst
diff --git a/doc/stages/readers.nitf.rst b/doc/stages/readers.nitf.rst