Updates to support building TileDb

PDAL · Mar 2, 2020 · 925e57d · 925e57d
1 parent 806489c
commit 925e57d
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diff --git a/scripts/azp/linux.yml b/scripts/azp/linux.yml
@@ -5,7 +5,7 @@ jobs:
   pool:
     vmImage: ubuntu-16.04
   container:
-      image: pdal/azp-dependencies:latest
+      image: pdal/ubuntubase:latest
       options: --privileged
   timeoutInMinutes: 60
   steps:
@@ -20,6 +20,7 @@ jobs:
         -DCMAKE_INSTALL_PREFIX=`pwd`/../install \
         -DBUILD_PLUGIN_I3S=ON \
         -DBUILD_PLUGIN_NITF=ON \
+        -DBUILD_PLUGIN_TILEDB=ON \
         -DBUILD_PLUGIN_ICEBRIDGE=ON \
         -DBUILD_PLUGIN_HDF=ON \
         -DBUILD_PLUGIN_PGPOINTCLOUD=ON \

diff --git a/...pts/docker/ubuntu/dependencies/Dockerfile → ...pts/docker/ubuntu/Dockerfile.dependencies b/...pts/docker/ubuntu/dependencies/Dockerfile → ...pts/docker/ubuntu/Dockerfile.dependencies
@@ -4,7 +4,7 @@ MAINTAINER Howard Butler <howard@hobu.co>
 ARG PDAL_VERSION=master
 ARG DESTDIR="/build"
 ARG PARALLEL=2
-ARG tiledb_version=1.4.1
+ARG TILEDB_VERSION=1.7.2
 
 ENV CC gcc
 ENV CXX g++
@@ -13,86 +13,92 @@ RUN apt-get update -qq; \
     apt-get -qq remove postgis; \
     apt-get install -y --fix-missing --no-install-recommends \
         software-properties-common \
-        apt-transport-https ca-certificates gnupg software-properties-common wget
+        apt-transport-https ca-certificates gnupg software-properties-common \
+        wget
 
-RUN wget -O - https://apt.kitware.com/keys/kitware-archive-latest.asc 2>/dev/null | apt-key add - \
+RUN wget -O - https://apt.kitware.com/keys/kitware-archive-latest.asc \
+    2>/dev/null | apt-key add - \
     && apt-add-repository 'deb https://apt.kitware.com/ubuntu/ bionic main'
 
-RUN  apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -y --fix-missing --no-install-recommends \
-        build-essential \
-        ca-certificates \
-        libfreexl-dev \
-        cmake \
-        curl \
-        gfortran \
-        git \
-        libarpack2-dev \
-        libflann-dev \
-        libhdf5-serial-dev \
-        liblapack-dev \
-        libtiff5-dev \
-        openssh-client \
-        python3-dev \
-        python3-numpy \
-        software-properties-common \
-        wget \
-        automake \
-        libtool \
-        libhdf5-dev \
-        libboost-filesystem1.65-dev \
-        libboost-iostreams1.65-dev \
-        libboost-program-options1.65-dev \
-        libboost-system1.65-dev \
-        libboost-thread1.65-dev \
-        clang \
-        clang-6.0 \
-        libc6-dev \
-        libopenjp2-7-dev \
-        libc6-dev \
-        libnetcdf-dev \
-        libpng-dev \
-        libjpeg-dev \
-        libgif-dev \
-        libwebp-dev \
-        libhdf4-alt-dev \
-        libhdf5-dev \
-        unixodbc-dev \
-        libsqlite3-dev \
-        libltdl-dev \
-        libcurl4-openssl-dev \
-        libssl-dev \
-        python3-numpy \
-        libdap-dev\
-        cython \
-        python3-pip \
-        time \
-        libhpdf-dev \
-        python3-setuptools \
-        libhpdf-dev \
-        unzip \
-        libzstd-dev \
-        libeigen3-dev \
-        ninja-build \
-        sqlite3 \
-        libgeos-dev \
-        cython \
-        python3-pip \
-        time \
-        ninja-build \
-        python3-setuptools \
-        unzip \
-        libeigen3-dev \
-        libxml2-dev \
-        libssl-dev \
-        liblzma-dev \
-        libzstd1-dev \
-        pkg-config \
-        bash-completion \
-        ninja-build \
-        sqlite3 \
-        libgeos-dev \
+RUN apt-get update && DEBIAN_FRONTEND=noninteractive apt-get install -y \
+    --fix-missing --no-install-recommends \
+    build-essential \
+    ca-certificates \
+    libfreexl-dev \
+    cmake \
+    curl \
+    gfortran \
+    git \
+    libarpack2-dev \
+    libflann-dev \
+    libhdf5-serial-dev \
+    liblapack-dev \
+    libtiff5-dev \
+    openssh-client \
+    python3-dev \
+    python3-numpy \
+    software-properties-common \
+    wget \
+    automake \
+    libtool \
+    libhdf5-dev \
+    libboost-filesystem1.65-dev \
+    libboost-iostreams1.65-dev \
+    libboost-program-options1.65-dev \
+    libboost-system1.65-dev \
+    libboost-thread1.65-dev \
+    clang \
+    clang-6.0 \
+    libc6-dev \
+    libopenjp2-7-dev \
+    libc6-dev \
+    libnetcdf-dev \
+    libpng-dev \
+    libjpeg-dev \
+    libgif-dev \
+    libwebp-dev \
+    libhdf4-alt-dev \
+    libhdf5-dev \
+    unixodbc-dev \
+    libsqlite3-dev \
+    libltdl-dev \
+    libcurl4-openssl-dev \
+    libssl-dev \
+    python3-numpy \
+    libdap-dev\
+    cython \
+    python3-pip \
+    time \
+    libhpdf-dev \
+    python3-setuptools \
+    libhpdf-dev \
+    unzip \
+    libzstd-dev \
+    libeigen3-dev \
+    ninja-build \
+    sqlite3 \
+    libgeos-dev \
+    cython \
+    python3-pip \
+    time \
+    ninja-build \
+    python3-setuptools \
+    unzip \
+    libeigen3-dev \
+    libxml2-dev \
+    libssl-dev \
+    liblzma-dev \
+    libzstd1-dev \
+    pkg-config \
+    bash-completion \
+    ninja-build \
+    sqlite3 \
+    libgeos-dev \
 	libpq-dev \
 	libfreexl-dev \
+    lbzip2 \
+    liblz4-dev \
+    zlib1g-dev \
     && rm -rf /var/lib/apt/lists/*
 
 RUN git clone https://github.com/LASzip/LASzip.git laszip \
@@ -121,7 +127,6 @@ RUN git clone  https://github.com/hobu/laz-perf.git \
     && DESTDIR=/ ninja install \
     && rm -rf /laz-perf
 
-
 RUN mkdir /nitro && cd /nitro \
     && git clone https://github.com/hobu/nitro \
     && cd nitro \
@@ -167,8 +172,6 @@ RUN git clone --depth 1 --branch v0.5.1 https://github.com/gadomski/cpd.git \
     && DESTDIR=/ ninja install  \
     && rm -rf /cpd
 
-
-
 RUN git clone https://github.com/OSGeo/PROJ.git --branch 6.1 proj \
     && cd proj \
     && ./autogen.sh \
@@ -178,7 +181,6 @@ RUN git clone https://github.com/OSGeo/PROJ.git --branch 6.1 proj \
     && make install DESTDIR=/ \
     && rm -rf /proj
 
-
 RUN git clone --branch master https://github.com/OSGeo/libgeotiff.git \
     &&    cd libgeotiff/libgeotiff \
     && ./autogen.sh \
@@ -191,28 +193,41 @@ RUN git clone --branch master https://github.com/OSGeo/libgeotiff.git \
 RUN git clone --branch release/3.0 https://github.com/OSGeo/gdal.git \
     &&    cd gdal/gdal \
     && ./configure --prefix=/usr \
-            --mandir=/usr/share/man \
-            --includedir=/usr/include/gdal \
-            --with-threads \
-            --with-grass=no \
-            --with-hide-internal-symbols=yes \
-            --with-rename-internal-libtiff-symbols=yes \
-            --with-rename-internal-libgeotiff-symbols=yes \
-            --with-libtiff=/usr/ \
-            --with-geos=/usr/bin/geos-config \
-            --with-geotiff=/usr \
-            --with-proj=/usr \
-            --with-ogdi=no \
-            --with-curl \
-            --with-ecw=no \
-            --with-mrsid=no \
+        --mandir=/usr/share/man \
+        --includedir=/usr/include/gdal \
+        --with-threads \
+        --with-grass=no \
+        --with-hide-internal-symbols=yes \
+        --with-rename-internal-libtiff-symbols=yes \
+        --with-rename-internal-libgeotiff-symbols=yes \
+        --with-libtiff=/usr/ \
+        --with-geos=/usr/bin/geos-config \
+        --with-geotiff=/usr \
+        --with-proj=/usr \
+        --with-ogdi=no \
+        --with-curl \
+        --with-ecw=no \
+        --with-mrsid=no \
     && make -j ${PARALLEL} \
     && make install \
     && make install DESTDIR=/ \
     && rm -rf /gdal
 
+RUN git clone --branch ${TILEDB_VERSION} \
+    https://github.com/TileDB-Inc/TileDB.git \
+    && cd TileDB \
+    && mkdir build \
+    && cd build \
+    && cmake .. -G "Unix Makefiles" -DTILEDB_TBB=OFF -DTILEDB_TESTS=OFF \
+    && make \
+    && make install-tiledb \
+    && cd / \
+    && rm -rf TileDB
+
 RUN curl -LOs http://www.gaia-gis.it/gaia-sins/libspatialite-sources/libspatialite-5.0.0-beta0.tar.gz && tar zxvf libspatialite-5.0.0-beta0.tar.gz && cd /libspatialite-5.0.0-beta0 \
-    && CXXFLAGS="-DACCEPT_USE_OF_DEPRECATED_PROJ_API_H=1" CFLAGS="-DACCEPT_USE_OF_DEPRECATED_PROJ_API_H=1" ./configure --prefix=/usr \
+    && CXXFLAGS="-DACCEPT_USE_OF_DEPRECATED_PROJ_API_H=1" \
+        CFLAGS="-DACCEPT_USE_OF_DEPRECATED_PROJ_API_H=1" \
+        ./configure --prefix=/usr \
     && make -j 4 \
     && make install