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Remove rgdal and maptools from data.atmosphere #3228

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merged 12 commits into from
Nov 6, 2023

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istfer
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@istfer istfer commented Nov 1, 2023

Description

Per issue #2914 made changes to data.atmosphere. Modified places where rgdal and maptools were used, shouldn't break anything.

Motivation and Context

See #2914. We have to keep downgrading our R versions because of these packages.

Review Time Estimate

  • Immediately
  • Within one week
  • When possible

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • My change requires a change to the documentation.
  • My name is in the list of CITATION.cff
  • I have updated the CHANGELOG.md.
  • I have updated the documentation accordingly.
  • I have read the CONTRIBUTING document.
  • I have added tests to cover my changes.
  • All new and existing tests passed.

@istfer istfer changed the title Remove rgdal data atmosphere Remove rgdal from data.atmosphere Nov 1, 2023
rh2m[s, hr] <- grib$band3[index]
ugrd10m[s, hr] <- grib$band4[index]
vgrd10m[s, hr] <- grib$band5[index]
pressfc[s, hr] <- grib_data_df$`SFC=Ground or water surface; Pressure [Pa]`[index]
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not sure if you want to access these by index, for now I used the fullnames

@istfer istfer changed the title Remove rgdal from data.atmosphere Remove rgdal and maptools from data.atmosphere Nov 1, 2023
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istfer commented Nov 3, 2023

Not sure how to resolve CI errors with this one. I ran generate dependencies and suntools is in docker/depends/pecan.depends.R list

document modules/data.atmosphere
  ℹ Updating PEcAn.data.atmosphere documentation
  ℹ Loading PEcAn.data.atmosphere
  Error in load_imports(path) : The package "suntools" is required.
  Calls: <Anonymous> ... load_imports -> deps_check_installed -> check_installed
  Execution halted
  make: *** [Makefile:174: .doc/modules/data.atmosphere] Error 1
  Error: Process completed with exit code 2.

@mdietze mdietze added this pull request to the merge queue Nov 6, 2023
Merged via the queue into PecanProject:develop with commit 91531ae Nov 6, 2023
10 of 12 checks passed
@istfer istfer deleted the rgdal_data_atmosphere branch November 29, 2023 07:49
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2 participants