Metabolic-Modeling---Yield-Analysis-of-PhaG

Repository containing scripts and analysis for Qiang et al., "Metabolic engineering strategies to produce medium-chain oleochemicals via acyl-ACP:CoA transacylase activity".

Contents

• Oleo_iML1515.xml (A modified SBML version of the iML1515 model containing olechemical reactions)
• PhaG yield analysis.ipynb (ipython notebook calculating the theoretical yield of several products via different pathways)

Python Dependencies

• cobra 0.22.1
• pandas 1.3.2