ID16S-v1.0a

Changes

• create_figure.py: Added --fontsize, --height, --width and --legend options.
• create_figure.py: Repositioned legend for consistency (moved to bottom right) and removed its frame.
• run_ID16S.pl: Added plot options.
• run_ID16S.pl: Now generates a log file (ID16S.log)
• run_ID16S.pl: Added --replot options => skips everything but plots (useful to replot/tweak figures)

ID16S-v1.0

ID16S-v1.0

Updated release that fixes various issues

Changes

• run_ID16S.pl: now generates distribution plots automatically.
• create_figure.py: now italicizes names properly depending on taxonomic ranks + svg font are now editable
• download_ID16S_dbs.pl: the NCBI datasets command line now matches its current release ## Tested with NCBI datasets v.16.17.3
• generate_database.pl: now creates a timestamp + minor fixes.
• setup_ID16S.pl: fixed subdirs paths
• Updated the prebuilt normalization database to May 30th 2024. taxon_links.tsv.gz is now compressed to save space.
• Simplified the README
• Minor code cleanup

ID16S-v0.9

Added cutoff to make visualizations more pretty

ID16S-v0.8a

Fully functional release. Works as intended.