@PriceLab

The Price Lab @ the Institute for Systems Biology

  • Jupyter Notebook Updated Feb 28, 2017
  • Fit transcriptional regulatory networks using gene expression, priors, machine learning

    Jupyter Notebook 2 Updated Feb 28, 2017
  • A service offering (relatively short) DNA sequences, by genone and chromosome location.

    R Updated Feb 15, 2017
  • Jupyter Notebook Updated Feb 10, 2017
  • Large datasets for running auxiliary TReNA tests

    Updated Feb 6, 2017
  • JavaScript Updated Jul 19, 2016
  • The meme suite's fimo (find motif) as a microservice, written in python, with R and python clients

    Python 1 Updated Jun 30, 2016
  • A collection of simple functions, in Python and R, providing access to remote computation and remote data.

    2 1 Updated Jun 29, 2016
  • A docker container to build snapr

    Shell Updated Jun 23, 2016
  • an R package with miscellaneous functions and public data for the exploration and analysis of gene regulation

    R Updated Jun 16, 2016
  • R Updated Jun 11, 2016
  • informal annotation of chromosomal locations

    R Updated Mar 21, 2016
  • Shell 1 Updated Nov 19, 2015
  • Code and files for performing transcription factor knockout and overexpression simulations on genome-scale regulatory-metabolic models using the updated PROM framework.

    Matlab 1 Updated Sep 10, 2015
  • Processing data for the AMP-AD consortia

    R Updated Apr 30, 2015
  • SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis

    C++ 25 6 Updated Apr 7, 2015
  • R Updated May 28, 2014
  • AUREA: Adaptive Unified Relative Expression Analyser

    Python 1 1 Updated Dec 8, 2013
  • ITEP - This is the version published and maintained by the Price Lab.

    Python 10 Updated Dec 7, 2013
  • C++ 1 1 Updated Dec 21, 2012