@PriceLab

Hood-Price Lab for Systems Biomedicine

The Hood-Price Lab at the Institute for Systems Biology is integrating biology, technology and computational science to enable a P4 approach to Medicine.

  • R 1 Apache-2.0 Updated Aug 17, 2018
  • web interface for a variety of trena analyses

    R Apache-2.0 Updated Aug 17, 2018
  • Code and commentary from The Self-Taught Programmer, Althoff 2016: python + R

    JavaScript Apache-2.0 Updated Aug 17, 2018
  • This is a space for developing the MotifDb Package. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/MotifDb.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=MotifDb.

    R 1 1 Updated Aug 17, 2018
  • The meme suite's fimo (find motif) as a microservice, written in python, with R and python clients

    R 2 MIT Updated Aug 13, 2018
  • R Updated Aug 8, 2018
  • Genome track visualization in your web browser, from R - a Bioconductor package

    R MIT Updated Aug 3, 2018
  • scripts I use for making genome-scale transcriptional regulatory networks

    R 5 Updated Jul 31, 2018
  • Network visualization in your web browser, from R - a Bioconductor package

    R MIT Updated Jul 17, 2018
  • A package for building trena single gene models

    R 1 Apache-2.0 Updated Jul 12, 2018
  • Example code to embed Cytoscape.js into a R Shiny application and generate a standalone figures with Cytoscape.js from R

    JavaScript 13 Apache-2.0 Updated Jul 11, 2018
  • Prediction of shannon diversity from metabolomic data - paper code

    Updated May 23, 2018
  • This is the API for the translator biqquery project

    Python Updated May 17, 2018
  • Samtools libraries

    GPL-3.0 Updated Mar 14, 2018
  • Jupyter Notebook MIT Updated Mar 9, 2018
  • This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/trena.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=trena.

    R 2 Updated Mar 1, 2018
  • trena jupyter notebooks for Rich Gelinas

    Jupyter Notebook MIT Updated Jan 19, 2018
  • Footprint Machine Learning

    R Updated Dec 21, 2017
  • notebooks and code for ensemble learning of footprint classification

    Jupyter Notebook 1 Updated Dec 19, 2017
  • collection of scripts that apply trena and its solvers in new ways

    R 1 Updated Dec 8, 2017
  • HTML Updated Dec 6, 2017
  • Cancer project with JHU

    GPL-3.0 Updated Dec 6, 2017
  • A python package for Probanno!

    Python 6 2 Updated Dec 4, 2017
  • the latest versions of trena-related packages, built and ready to install

    R Updated Nov 20, 2017
  • hunt for possibly functional SNPs in TSNARE1 regulation

    R MIT Updated Oct 13, 2017
  • R MIT Updated Oct 10, 2017
  • code and data for trena models of the Huntingtin gene

    R Updated Sep 22, 2017
  • Fit transcriptional regulatory networks using gene expression, priors, machine learning

    Jupyter Notebook 2 1 Updated Aug 16, 2017
  • an R package providing visualization and run-time support for trena

    HTML MIT Updated Aug 5, 2017
  • This code allows you to create divergence matrices from Wikum et al

    Python GPL-3.0 Updated Jul 27, 2017