This release contains C. elegans (ce10) and D. melanogaster (dm3) genomes. To download additional genomes follow the instructions here: http://przemol.github.io/seqplots/#genomes-managment
Installers:
- SeqPlots-3.0.12.dmg - macOS installer - Mac OS X 10.9 or higher required
- SeqPlots_Setup_3.0.12.exe - MS Windows installer - 64bit Windows 7 or higher required
- SeqPlots-3.0.12-x86_64.AppImage - Ubuntu Linux application - Ubuntu 16.04 LTS required
Zip/Tarballs containing source code:
- Source Code - compiled with node.js
Linux installation notes:
Only Ubuntu 16.04.1 LTS (Xenial Xerus) is supported by SeqPlots desktop app. Please update your system: http://releases.ubuntu.com/16.04/ or install R/Bioconductor version of SeqPlots: http://bioconductor.org/packages/seqplots
GUI version requires following libraries:
libgtk2.0, libxtst6, libxss1, libgconf-2-4, libnss3, libasound2, libgfortran3
To install them under Ubuntu type in the console:
sudo apt-get update
sudo apt-get -y install libgtk2.0 libxtst6 libxss1 libgconf-2-4 libnss3 libasound2 libgfortran3
Using the AppImage on Ubuntu Server requires following packages:
desktop-file-utils, xdg-utils, zenity
sudo apt-get update
sudo apt-get install desktop-file-utils xdg-utils zenity
Before running SeqPlots the application should be made executable, either by right click => Properties => Permissions => Allow executing file as program or running following command:
chmod a+x SeqPlots-3.0.12-x86_64.AppImage