Use sphinx.ext.linkcode for more precise source code links (#11851) (…

…#12146)

* switched from sphinx.ext.viewcode to sphinx.ext.linkcode

* removed extra line

* Add section header for source code links

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* removed docstring

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* update return string

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* added back blank line

* Added a method to determine the GitHub branch

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* add blank line

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* remove print statement

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* Try to fix error for contextlib file

We got this stacktrace:

Traceback (most recent call last):
  File "/home/vsts/work/1/s/.tox/docs/lib/python3.8/site-packages/sphinx/events.py", line 96, in emit
    results.append(listener.handler(self.app, *args))
  File "/home/vsts/work/1/s/.tox/docs/lib/python3.8/site-packages/sphinx/ext/linkcode.py", line 55, in doctree_read
    uri = resolve_target(domain, info)
  File "/home/vsts/work/1/s/docs/conf.py", line 216, in linkcode_resolve
    file_name = PurePath(full_file_name).relative_to(repo_root)
  File "/opt/hostedtoolcache/Python/3.8.18/x64/lib/python3.8/pathlib.py", line 908, in relative_to
    raise ValueError("{!r} does not start with {!r}"
ValueError: '/opt/hostedtoolcache/Python/3.8.18/x64/lib/python3.8/contextlib.py' does not start with '/home/vsts/work/1/s'

We shouldn't even attempt to generate a link for the file contextlib.py

* Try to fix error for Jenkins run #20240221.52

New build failed with this stacktrace:
Traceback (most recent call last):
  File "/home/vsts/work/1/s/.tox/docs/lib/python3.8/site-packages/sphinx/events.py", line 96, in emit
    results.append(listener.handler(self.app, *args))
  File "/home/vsts/work/1/s/.tox/docs/lib/python3.8/site-packages/sphinx/ext/linkcode.py", line 55, in doctree_read
    uri = resolve_target(domain, info)
  File "/home/vsts/work/1/s/docs/conf.py", line 215, in linkcode_resolve
    full_file_name = inspect.getsourcefile(obj)
  File "/opt/hostedtoolcache/Python/3.8.18/x64/lib/python3.8/inspect.py", line 696, in getsourcefile
    filename = getfile(object)
  File "/opt/hostedtoolcache/Python/3.8.18/x64/lib/python3.8/inspect.py", line 665, in getfile
    raise TypeError('{!r} is a built-in class'.format(object))
TypeError: <class 'builtins.CustomClassical'> is a built-in class

So I added a condition that the obj should not be a built-in

* Check that qiskit in module name sooner

* moved valid code object verification earlier

* added try except statement to getattr call

* added extra try/except block

* Also support Azure Pipelines

* removed unused import

* Revert Azure support to keep things simple

* added extra "/" to final URL

* Move GitHub branch logic to GitHub Action

* switched to importlib and removed redundant block of code

* Apply suggestions from code review

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>

* added back spaces

* Clarify docs_deploy GitHub logic

1. Remove misleading PR conditional. This worfklow doesn't even run in PRs. It was bad copy-pasta from the runtime repo
2. Clarify why we point tag builds to their stable branch name

* Use pathlib for relativizing file name

* Fix relative_to() path

* Remove tox prefix

---------

Co-authored-by: Eric Arellano <14852634+Eric-Arellano@users.noreply.github.com>
(cherry picked from commit 97788f0)

Co-authored-by: melechlapson <melechlapson@yahoo.com>

.github/workflows/docs_deploy.yml

@@ -29,9 +29,21 @@ jobs:
       - name: Install dependencies
         run: tools/install_ubuntu_docs_dependencies.sh
 
+      - name: Determine GitHub branch name
+        run: |
+          # Tags like 1.0.0 and 1.0.0rc1 should point to their stable branch. We do this
+          # to reduce the diff in the qiskit/documentation repository between generating
+          # the API docs from a tag release versus a workflow_dispatch.
+          if [[ $GITHUB_REF_NAME =~ ^([0-9]+\.[0-9]+) ]]; then
+            BRANCH_NAME="stable/${BASH_REMATCH[1]}"
+          else
+              BRANCH_NAME="$GITHUB_REF_NAME"
+          fi
+          echo "Using branch '${BRANCH_NAME}' for GitHub source code links"
+          echo "QISKIT_DOCS_GITHUB_BRANCH_NAME=$BRANCH_NAME" >> $GITHUB_ENV
+
       - name: Build documentation
         run: tox run -e docs
-
       - name: Store built documentation artifact
         uses: actions/upload-artifact@v4
         with:

docs/conf.py

@@ -18,6 +18,12 @@
 
 import datetime
 import doctest
+import importlib
+import inspect
+import os
+import re
+from pathlib import Path
+
 
 project = "Qiskit"
 project_copyright = f"2017-{datetime.date.today().year}, Qiskit Development Team"
@@ -39,7 +45,7 @@
     "sphinx.ext.intersphinx",
     "sphinx.ext.doctest",
     # This is used by qiskit/documentation to generate links to github.com.
-    "sphinx.ext.viewcode",
+    "sphinx.ext.linkcode",
     "matplotlib.sphinxext.plot_directive",
     "reno.sphinxext",
     "sphinxcontrib.katex",
@@ -155,3 +161,54 @@
 # ----------------------------------------------------------------------------------
 
 plot_html_show_formats = False
+
+
+# ----------------------------------------------------------------------------------
+# Source code links
+# ----------------------------------------------------------------------------------
+
+REPO_ROOT = Path(__file__).resolve().parents[1]
+
+
+def linkcode_resolve(domain, info):
+    if domain != "py":
+        return None
+
+    module_name = info["module"]
+    if "qiskit" not in module_name:
+        return None
+
+    try: 
+        module = importlib.import_module(module_name)
+    except ModuleNotFoundError:
+        return None
+
+    obj = module
+    for part in info["fullname"].split("."):
+        try:
+            obj = getattr(obj, part)
+        except AttributeError:
+            return None
+
+    try:
+        full_file_name = inspect.getsourcefile(obj)
+    except TypeError:
+        return None
+    if full_file_name is None:
+        return None
+    try:
+        relative_file_name = Path(full_file_name).resolve().relative_to(REPO_ROOT)
+        file_name = re.sub(r"\.tox\/.+\/site-packages\/", "", str(relative_file_name))
+    except ValueError:
+        return None
+
+    try:
+        source, lineno = inspect.getsourcelines(obj)
+    except (OSError, TypeError):
+        linespec = ""
+    else:
+        ending_lineno = lineno + len(source) - 1
+        linespec = f"#L{lineno}-L{ending_lineno}"
+
+    github_branch = os.environ.get("QISKIT_DOCS_GITHUB_BRANCH_NAME", "main")
+    return f"https://github.com/Qiskit/qiskit/tree/{github_branch}/{file_name}{linespec}"

tox.ini

@@ -15,7 +15,15 @@ setenv =
   QISKIT_SUPRESS_PACKAGING_WARNINGS=Y
   QISKIT_TEST_CAPTURE_STREAMS=1
   QISKIT_PARALLEL=FALSE
-passenv = RAYON_NUM_THREADS, OMP_NUM_THREADS, QISKIT_PARALLEL, RUST_BACKTRACE, SETUPTOOLS_ENABLE_FEATURES, QISKIT_TESTS, QISKIT_IN_PARALLEL
+passenv = 
+  RAYON_NUM_THREADS
+  OMP_NUM_THREADS
+  QISKIT_PARALLEL
+  RUST_BACKTRACE
+  SETUPTOOLS_ENABLE_FEATURES
+  QISKIT_TESTS
+  QISKIT_IN_PARALLEL
+  QISKIT_DOCS_GITHUB_BRANCH_NAME
 deps =
     setuptools_rust  # This is work around for the bug of tox 3 (see #8606 for more details.)
     -r{toxinidir}/requirements.txt