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API changes in 'ks' package breaks flowStats #16

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mikejiang opened this issue Oct 26, 2015 · 1 comment
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API changes in 'ks' package breaks flowStats #16

mikejiang opened this issue Oct 26, 2015 · 1 comment

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@mikejiang
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The following two APIs were moved from ks to feature package lately, which causes the error when building flowCore vignette.

Error : objectsdfltCounts’, ‘drvkdeare not exported by 'namespace:ks'

However feature package requires tcl/tk, which is the dependency we wanted avoid due to the discussion here.

These two functions are indirectly used by curv2Filter so we can''t simply drop them unless we want to deprecate curv2Filter.

I will see if I can make hardcopies of these two functions from features without much hassle.

@mikejiang
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It seems also has impact on openCyto::tailgate which directly uses drvkde for kernel density derivative estimation.

mikejiang pushed a commit to RGLab/openCyto that referenced this issue Oct 26, 2015
mikejiang pushed a commit to RGLab/openCyto that referenced this issue Oct 26, 2015
gfinak pushed a commit that referenced this issue Aug 21, 2017
… tcltk. close #16

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/flowStats@109925 bc3139a8-67e5-0310-9ffc-ced21a209358
mikejiang pushed a commit to RGLab/openCyto that referenced this issue May 27, 2019
git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/openCyto@109942 bc3139a8-67e5-0310-9ffc-ced21a209358
gaborcsardi pushed a commit to bioc/openCyto that referenced this issue Jul 12, 2023
git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/openCyto@109946 bc3139a8-67e5-0310-9ffc-ced21a209358
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