Skip to content

The tmRNA website is down, so we are not showing any links in the Ann… #426

The tmRNA website is down, so we are not showing any links in the Ann…

The tmRNA website is down, so we are not showing any links in the Ann… #426

Workflow file for this run

# This workflow will run the unit tests and build a new image on both Docker Hub and GitHub Packages.
# At least for now, the image will be created regardless of whether the tests are run successfully or not.
#
# References:
# - https://docs.github.com/en/actions/guides/building-and-testing-python
# - https://github.com/marketplace/actions/slack-notify
name: Building Docker containers
# Triggers the workflow on push or pull request events
on:
push:
paths-ignore:
- 'jenkins/**'
- 'kubernetes/**'
- 'nginx/**'
- 'openssl/**'
pull_request:
jobs:
test:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: '3.8'
- name: Install dependencies and rename local_settings file
run: |
python -m pip install --upgrade pip
pip install -r rnacentral/requirements.txt
pip install -r rnacentral/requirements_dev.txt
mv rnacentral/rnacentral/unit_test_local_settings.py rnacentral/rnacentral/local_settings.py
- name: Run tests
run: |
python rnacentral/manage.py test apiv1
python rnacentral/manage.py test export
python rnacentral/manage.py test portal
python rnacentral/manage.py test sequence_search
initial-notification:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Initial notification
uses: rtCamp/action-slack-notify@12e36fc18b0689399306c2e0b3e0f2978b7f1ee7
env:
SLACK_MESSAGE: 'Publishing images to Docker Hub and GitHub Packages'
SLACK_WEBHOOK: ${{ secrets.SLACK_WEBHOOK }}
MSG_MINIMAL: true
push_image_to_dockerhub:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: docker login
env:
DOCKER_USER: ${{ secrets.DOCKER_USER }}
DOCKER_PASSWORD: ${{ secrets.DOCKER_PASSWORD }}
run: docker login -u $DOCKER_USER -p $DOCKER_PASSWORD
- name: Get branch name
if: github.event_name != 'pull_request'
shell: bash
run: echo "BRANCH_NAME=$(echo ${GITHUB_REF#refs/heads/} | tr / -)" >> $GITHUB_ENV
- name: docker build
if: env.BRANCH_NAME != ''
run: docker build -f Dockerfile -t rnacentral/rnacentral-webcode:${{ env.BRANCH_NAME }} .
- name: docker push
if: env.BRANCH_NAME != ''
run: docker push rnacentral/rnacentral-webcode:${{ env.BRANCH_NAME }}
push_image_to_github:
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
steps:
- name: Checkout repository
uses: actions/checkout@v3
- name: Log in to the Container registry
uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a
with:
registry: ghcr.io
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@507c2f2dc502c992ad446e3d7a5dfbe311567a96
with:
images: ghcr.io/${{ github.repository }}
- name: Build and push Docker image
uses: docker/build-push-action@3b5e8027fcad23fda98b2e3ac259d8d67585f671
with:
context: .
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
final-notification:
runs-on: ubuntu-latest
needs: [push_image_to_dockerhub, push_image_to_github]
steps:
- uses: actions/checkout@v3
- name: Final notification
uses: rtCamp/action-slack-notify@12e36fc18b0689399306c2e0b3e0f2978b7f1ee7
env:
SLACK_MESSAGE: 'New image pushed to Docker Hub and GitHub Packages'
SLACK_WEBHOOK: ${{ secrets.SLACK_WEBHOOK }}
MSG_MINIMAL: true