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README.md

RNAcentral Website

Build Status

About

RNAcentral is an open public resource that offers integrated access to a comprehensive and up-to-date set of ncRNA sequences. For more information, please visit https://rnacentral.org/about-us.

The development of RNAcentral is coordinated by the European Bioinformatics Institute and is funded by the BBSRC.

Installation

  1. Clone Git repository:
git clone --recursive https://github.com/RNAcentral/rnacentral-webcode.git
  1. Edit database connection parameters in rnacentral/local_settings.py. Use the public postgres database when developing outside the EBI network.

  2. Run the app using Docker:

export RNACENTRAL_HOME=/path/to/rnacentral/code
cd $RNACENTRAL_HOME
docker-compose up --build

Docker Cheat Sheet

# connect to a running container
docker ps
docker exec -it <container_id> bash

API tests

  1. Login to the running Docker container (see above).

  2. Launch tests:

cd $RNACENTRAL_HOME
python rnacentral/apiv1/tests.py

Feedback

Feel free to give feedback using GitHub issues or get in touch using the Contact form on our website.

Technology overview

Python

Javascript

CSS

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