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Arioc v1.24
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@RWilton RWilton released this 23 Mar 15:43
· 136 commits to master since this release
v1.24
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Notes for Arioc v1.24:

The current build is v1.24.2351.18110.

New features

  • read-length distribution statistics in the AriocE (read encoding) component
  • better memory management (larger batch sizes, more detailed error reporting) in the nongapped aligner component of AriocU and AriocP

Bug fixes

  • AriocP: emit invalid FLAG bits for paired-end reads with one mate having exactly one mapping and the opposite mate having two or more mappings
  • AriocU, AriocP: emit invalid XM (methylation context) map when a read's reverse complement maps to the reverse complement of the start of the reference sequence
  • AriocP: emit incorrect MAPQ for paired-end mappings with dovetail orientation

Downloads

AriocSetup.msi: Windows binaries and examples
Arioc.w.124.zip: Windows source code
Arioc.x.124.zip: Linux source code
Arioc.RQA.124.zip: Linux examples

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